Protein–RNA interactions for Protein: A0A075B651

Trav4-4-dv10, T cell receptor alpha variable 4-4-DV10 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4-4-dv10A0A075B651 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
Trav4-4-dv10A0A075B651 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav4-4-dv10A0A075B651 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Trav4-4-dv10A0A075B651 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav4-4-dv10A0A075B651 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav4-4-dv10A0A075B651 Shroom3-211ENSMUST00000225438 5742 ntBASIC14.35□□□□□ -0.11
Trav4-4-dv10A0A075B651 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav4-4-dv10A0A075B651 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav4-4-dv10A0A075B651 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav4-4-dv10A0A075B651 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Trav4-4-dv10A0A075B651 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Trav4-4-dv10A0A075B651 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC14.35□□□□□ -0.11
Trav4-4-dv10A0A075B651 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Trav4-4-dv10A0A075B651 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC14.35□□□□□ -0.11
Trav4-4-dv10A0A075B651 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC14.35□□□□□ -0.11
Trav4-4-dv10A0A075B651 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC14.35□□□□□ -0.11
Trav4-4-dv10A0A075B651 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav4-4-dv10A0A075B651 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Trav4-4-dv10A0A075B651 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav4-4-dv10A0A075B651 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav4-4-dv10A0A075B651 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav4-4-dv10A0A075B651 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Trav4-4-dv10A0A075B651 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav4-4-dv10A0A075B651 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav4-4-dv10A0A075B651 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Trav4-4-dv10A0A075B651 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Trav4-4-dv10A0A075B651 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav4-4-dv10A0A075B651 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav4-4-dv10A0A075B651 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav4-4-dv10A0A075B651 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav4-4-dv10A0A075B651 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav4-4-dv10A0A075B651 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav4-4-dv10A0A075B651 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav4-4-dv10A0A075B651 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Trav4-4-dv10A0A075B651 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Trav4-4-dv10A0A075B651 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Trav4-4-dv10A0A075B651 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Trav4-4-dv10A0A075B651 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Trav4-4-dv10A0A075B651 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav4-4-dv10A0A075B651 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC14.34□□□□□ -0.11
Trav4-4-dv10A0A075B651 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC14.34□□□□□ -0.11
Trav4-4-dv10A0A075B651 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC14.34□□□□□ -0.11
Trav4-4-dv10A0A075B651 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Trav4-4-dv10A0A075B651 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav4-4-dv10A0A075B651 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav4-4-dv10A0A075B651 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav4-4-dv10A0A075B651 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav4-4-dv10A0A075B651 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Trav4-4-dv10A0A075B651 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Trav4-4-dv10A0A075B651 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Trav4-4-dv10A0A075B651 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Trav4-4-dv10A0A075B651 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.11
Trav4-4-dv10A0A075B651 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Trav4-4-dv10A0A075B651 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC14.33□□□□□ -0.11
Trav4-4-dv10A0A075B651 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav4-4-dv10A0A075B651 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav4-4-dv10A0A075B651 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav4-4-dv10A0A075B651 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav4-4-dv10A0A075B651 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Trav4-4-dv10A0A075B651 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Trav4-4-dv10A0A075B651 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav4-4-dv10A0A075B651 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Trav4-4-dv10A0A075B651 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav4-4-dv10A0A075B651 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Trav4-4-dv10A0A075B651 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Trav4-4-dv10A0A075B651 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav4-4-dv10A0A075B651 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
Trav4-4-dv10A0A075B651 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav4-4-dv10A0A075B651 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC14.33□□□□□ -0.12
Trav4-4-dv10A0A075B651 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav4-4-dv10A0A075B651 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav4-4-dv10A0A075B651 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav4-4-dv10A0A075B651 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav4-4-dv10A0A075B651 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Trav4-4-dv10A0A075B651 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav4-4-dv10A0A075B651 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav4-4-dv10A0A075B651 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Trav4-4-dv10A0A075B651 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav4-4-dv10A0A075B651 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav4-4-dv10A0A075B651 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav4-4-dv10A0A075B651 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav4-4-dv10A0A075B651 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Trav4-4-dv10A0A075B651 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Trav4-4-dv10A0A075B651 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav4-4-dv10A0A075B651 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav4-4-dv10A0A075B651 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav4-4-dv10A0A075B651 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
Trav4-4-dv10A0A075B651 Gm43702-201ENSMUST00000198772 2546 ntBASIC14.31□□□□□ -0.12
Trav4-4-dv10A0A075B651 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
Trav4-4-dv10A0A075B651 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav4-4-dv10A0A075B651 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC14.31□□□□□ -0.12
Trav4-4-dv10A0A075B651 Gm19094-201ENSMUST00000209791 1246 ntBASIC14.31□□□□□ -0.12
Trav4-4-dv10A0A075B651 Wdr70-203ENSMUST00000227371 1130 ntBASIC14.31□□□□□ -0.12
Trav4-4-dv10A0A075B651 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC14.31□□□□□ -0.12
Trav4-4-dv10A0A075B651 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav4-4-dv10A0A075B651 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav4-4-dv10A0A075B651 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Trav4-4-dv10A0A075B651 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav4-4-dv10A0A075B651 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav4-4-dv10A0A075B651 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 34.4 ms