Protein–RNA interactions for Protein: A0A075B638

Trav4-2, T cell receptor alpha variable 4-2 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4-2A0A075B638 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav4-2A0A075B638 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav4-2A0A075B638 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav4-2A0A075B638 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Trav4-2A0A075B638 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.07
Trav4-2A0A075B638 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
Trav4-2A0A075B638 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
Trav4-2A0A075B638 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.07
Trav4-2A0A075B638 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC14.58□□□□□ -0.08
Trav4-2A0A075B638 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav4-2A0A075B638 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav4-2A0A075B638 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav4-2A0A075B638 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav4-2A0A075B638 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC14.58□□□□□ -0.08
Trav4-2A0A075B638 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav4-2A0A075B638 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
Trav4-2A0A075B638 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav4-2A0A075B638 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav4-2A0A075B638 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav4-2A0A075B638 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav4-2A0A075B638 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC14.58□□□□□ -0.08
Trav4-2A0A075B638 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav4-2A0A075B638 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav4-2A0A075B638 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
Trav4-2A0A075B638 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Trav4-2A0A075B638 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav4-2A0A075B638 Cxcl14-202ENSMUST00000224801 1467 ntBASIC14.57□□□□□ -0.08
Trav4-2A0A075B638 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav4-2A0A075B638 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav4-2A0A075B638 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Trav4-2A0A075B638 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Trav4-2A0A075B638 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav4-2A0A075B638 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav4-2A0A075B638 Cap2-205ENSMUST00000225824 1634 ntBASIC14.57□□□□□ -0.08
Trav4-2A0A075B638 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
Trav4-2A0A075B638 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC14.57□□□□□ -0.08
Trav4-2A0A075B638 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Trav4-2A0A075B638 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC14.57□□□□□ -0.08
Trav4-2A0A075B638 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Trav4-2A0A075B638 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
Trav4-2A0A075B638 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav4-2A0A075B638 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Trav4-2A0A075B638 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav4-2A0A075B638 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav4-2A0A075B638 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Trav4-2A0A075B638 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Trav4-2A0A075B638 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav4-2A0A075B638 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav4-2A0A075B638 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav4-2A0A075B638 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Trav4-2A0A075B638 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav4-2A0A075B638 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC14.56□□□□□ -0.08
Trav4-2A0A075B638 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Trav4-2A0A075B638 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Trav4-2A0A075B638 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav4-2A0A075B638 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav4-2A0A075B638 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav4-2A0A075B638 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav4-2A0A075B638 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav4-2A0A075B638 Gm7860-201ENSMUST00000121190 879 ntBASIC14.56□□□□□ -0.08
Trav4-2A0A075B638 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC14.56□□□□□ -0.08
Trav4-2A0A075B638 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav4-2A0A075B638 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav4-2A0A075B638 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Trav4-2A0A075B638 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav4-2A0A075B638 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Trav4-2A0A075B638 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav4-2A0A075B638 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav4-2A0A075B638 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Trav4-2A0A075B638 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav4-2A0A075B638 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav4-2A0A075B638 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav4-2A0A075B638 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav4-2A0A075B638 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Trav4-2A0A075B638 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav4-2A0A075B638 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav4-2A0A075B638 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Trav4-2A0A075B638 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Trav4-2A0A075B638 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC14.55□□□□□ -0.08
Trav4-2A0A075B638 Gm42501-201ENSMUST00000200220 1026 ntBASIC14.55□□□□□ -0.08
Trav4-2A0A075B638 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav4-2A0A075B638 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav4-2A0A075B638 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Trav4-2A0A075B638 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav4-2A0A075B638 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav4-2A0A075B638 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav4-2A0A075B638 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav4-2A0A075B638 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav4-2A0A075B638 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav4-2A0A075B638 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav4-2A0A075B638 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav4-2A0A075B638 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav4-2A0A075B638 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav4-2A0A075B638 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav4-2A0A075B638 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC14.54□□□□□ -0.08
Trav4-2A0A075B638 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Trav4-2A0A075B638 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC14.54□□□□□ -0.08
Trav4-2A0A075B638 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC14.54□□□□□ -0.08
Trav4-2A0A075B638 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav4-2A0A075B638 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC14.54□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms