Protein–RNA interactions for Protein: Q9Z0D9

Cx3cr1, CX3C chemokine receptor 1, mousemouse

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cx3cr1Q9Z0D9 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Cx3cr1Q9Z0D9 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Cx3cr1Q9Z0D9 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Cx3cr1Q9Z0D9 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
Cx3cr1Q9Z0D9 Gm27322-201ENSMUST00000184007 104 ntBASIC20.82■□□□□ 0.92
Cx3cr1Q9Z0D9 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Cx3cr1Q9Z0D9 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Cx3cr1Q9Z0D9 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Cx3cr1Q9Z0D9 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Cx3cr1Q9Z0D9 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Cx3cr1Q9Z0D9 Gm17082-201ENSMUST00000166043 1091 ntBASIC20.8■□□□□ 0.92
Cx3cr1Q9Z0D9 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
Cx3cr1Q9Z0D9 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC20.8■□□□□ 0.92
Cx3cr1Q9Z0D9 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
Cx3cr1Q9Z0D9 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Cx3cr1Q9Z0D9 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Cx3cr1Q9Z0D9 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Cx3cr1Q9Z0D9 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Cx3cr1Q9Z0D9 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Cx3cr1Q9Z0D9 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC20.75■□□□□ 0.91
Cx3cr1Q9Z0D9 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
Cx3cr1Q9Z0D9 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Cx3cr1Q9Z0D9 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Cx3cr1Q9Z0D9 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC20.74■□□□□ 0.91
Cx3cr1Q9Z0D9 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC20.74■□□□□ 0.91
Cx3cr1Q9Z0D9 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Cx3cr1Q9Z0D9 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Cx3cr1Q9Z0D9 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC20.73■□□□□ 0.91
Cx3cr1Q9Z0D9 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC20.73■□□□□ 0.91
Cx3cr1Q9Z0D9 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Cx3cr1Q9Z0D9 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Cx3cr1Q9Z0D9 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Cx3cr1Q9Z0D9 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC20.73■□□□□ 0.91
Cx3cr1Q9Z0D9 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC20.72■□□□□ 0.91
Cx3cr1Q9Z0D9 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Cx3cr1Q9Z0D9 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Cx3cr1Q9Z0D9 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Cx3cr1Q9Z0D9 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Cx3cr1Q9Z0D9 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC20.71■□□□□ 0.91
Cx3cr1Q9Z0D9 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Cx3cr1Q9Z0D9 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
Cx3cr1Q9Z0D9 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Cx3cr1Q9Z0D9 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
Cx3cr1Q9Z0D9 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Cx3cr1Q9Z0D9 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Cx3cr1Q9Z0D9 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
Cx3cr1Q9Z0D9 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC20.68■□□□□ 0.9
Cx3cr1Q9Z0D9 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Cx3cr1Q9Z0D9 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Cx3cr1Q9Z0D9 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
Cx3cr1Q9Z0D9 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Cx3cr1Q9Z0D9 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Cx3cr1Q9Z0D9 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Cx3cr1Q9Z0D9 AC153890.1-201ENSMUST00000220021 2469 ntBASIC20.66■□□□□ 0.9
Cx3cr1Q9Z0D9 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Cx3cr1Q9Z0D9 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC20.66■□□□□ 0.9
Cx3cr1Q9Z0D9 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
Cx3cr1Q9Z0D9 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Cx3cr1Q9Z0D9 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
Cx3cr1Q9Z0D9 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Cx3cr1Q9Z0D9 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Cx3cr1Q9Z0D9 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Cx3cr1Q9Z0D9 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC20.62■□□□□ 0.89
Cx3cr1Q9Z0D9 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC20.62■□□□□ 0.89
Cx3cr1Q9Z0D9 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Cx3cr1Q9Z0D9 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Cx3cr1Q9Z0D9 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Cx3cr1Q9Z0D9 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Cx3cr1Q9Z0D9 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Cx3cr1Q9Z0D9 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Cx3cr1Q9Z0D9 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Cx3cr1Q9Z0D9 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Cx3cr1Q9Z0D9 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Cx3cr1Q9Z0D9 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cx3cr1Q9Z0D9 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Cx3cr1Q9Z0D9 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
Cx3cr1Q9Z0D9 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
Cx3cr1Q9Z0D9 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Cx3cr1Q9Z0D9 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Cx3cr1Q9Z0D9 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Cx3cr1Q9Z0D9 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Cx3cr1Q9Z0D9 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Cx3cr1Q9Z0D9 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC20.54■□□□□ 0.88
Cx3cr1Q9Z0D9 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Cx3cr1Q9Z0D9 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cx3cr1Q9Z0D9 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Cx3cr1Q9Z0D9 Peli2-204ENSMUST00000226513 1320 ntBASIC20.53■□□□□ 0.88
Cx3cr1Q9Z0D9 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Cx3cr1Q9Z0D9 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Cx3cr1Q9Z0D9 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Cx3cr1Q9Z0D9 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Cx3cr1Q9Z0D9 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Cx3cr1Q9Z0D9 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Cx3cr1Q9Z0D9 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
Cx3cr1Q9Z0D9 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Cx3cr1Q9Z0D9 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Cx3cr1Q9Z0D9 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
Cx3cr1Q9Z0D9 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Cx3cr1Q9Z0D9 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Cx3cr1Q9Z0D9 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 52.8 ms