Protein–RNA interactions for Protein: Q9QXN0

Shroom3, Protein Shroom3, mousemouse

Predictions only

Length 1,986 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom3Q9QXN0 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
Shroom3Q9QXN0 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
Shroom3Q9QXN0 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC25.21■■□□□ 1.63
Shroom3Q9QXN0 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
Shroom3Q9QXN0 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC25.2■■□□□ 1.62
Shroom3Q9QXN0 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC25.2■■□□□ 1.62
Shroom3Q9QXN0 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
Shroom3Q9QXN0 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
Shroom3Q9QXN0 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC25.19■■□□□ 1.62
Shroom3Q9QXN0 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC25.18■■□□□ 1.62
Shroom3Q9QXN0 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
Shroom3Q9QXN0 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
Shroom3Q9QXN0 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC25.17■■□□□ 1.62
Shroom3Q9QXN0 Gm6345-201ENSMUST00000180378 1691 ntBASIC25.17■■□□□ 1.62
Shroom3Q9QXN0 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
Shroom3Q9QXN0 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
Shroom3Q9QXN0 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
Shroom3Q9QXN0 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
Shroom3Q9QXN0 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC25.14■■□□□ 1.62
Shroom3Q9QXN0 Gm6206-201ENSMUST00000133472 2199 ntBASIC25.14■■□□□ 1.62
Shroom3Q9QXN0 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC25.14■■□□□ 1.62
Shroom3Q9QXN0 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.61
Shroom3Q9QXN0 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
Shroom3Q9QXN0 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
Shroom3Q9QXN0 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC25.13■■□□□ 1.61
Shroom3Q9QXN0 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC25.11■■□□□ 1.61
Shroom3Q9QXN0 Zxda-201ENSMUST00000117281 2621 ntBASIC25.11■■□□□ 1.61
Shroom3Q9QXN0 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
Shroom3Q9QXN0 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
Shroom3Q9QXN0 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC25.09■■□□□ 1.61
Shroom3Q9QXN0 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC25.09■■□□□ 1.61
Shroom3Q9QXN0 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
Shroom3Q9QXN0 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
Shroom3Q9QXN0 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC25.06■■□□□ 1.6
Shroom3Q9QXN0 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC25.06■■□□□ 1.6
Shroom3Q9QXN0 Gm43445-201ENSMUST00000198564 2091 ntBASIC25.05■■□□□ 1.6
Shroom3Q9QXN0 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
Shroom3Q9QXN0 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC25.03■■□□□ 1.6
Shroom3Q9QXN0 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
Shroom3Q9QXN0 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
Shroom3Q9QXN0 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC25.02■■□□□ 1.6
Shroom3Q9QXN0 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC25.01■■□□□ 1.59
Shroom3Q9QXN0 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC25.01■■□□□ 1.59
Shroom3Q9QXN0 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC25.01■■□□□ 1.59
Shroom3Q9QXN0 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC25■■□□□ 1.59
Shroom3Q9QXN0 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
Shroom3Q9QXN0 Gm24970-201ENSMUST00000175582 82 ntBASIC25■■□□□ 1.59
Shroom3Q9QXN0 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC25■■□□□ 1.59
Shroom3Q9QXN0 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
Shroom3Q9QXN0 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
Shroom3Q9QXN0 Gm9905-201ENSMUST00000065740 1845 ntBASIC24.97■■□□□ 1.59
Shroom3Q9QXN0 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
Shroom3Q9QXN0 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
Shroom3Q9QXN0 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
Shroom3Q9QXN0 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC24.95■■□□□ 1.58
Shroom3Q9QXN0 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
Shroom3Q9QXN0 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC24.95■■□□□ 1.58
Shroom3Q9QXN0 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
Shroom3Q9QXN0 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
Shroom3Q9QXN0 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
Shroom3Q9QXN0 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
Shroom3Q9QXN0 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC24.93■■□□□ 1.58
Shroom3Q9QXN0 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC24.93■■□□□ 1.58
Shroom3Q9QXN0 Gm5987-201ENSMUST00000196433 1151 ntBASIC24.93■■□□□ 1.58
Shroom3Q9QXN0 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC24.92■■□□□ 1.58
Shroom3Q9QXN0 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC24.92■■□□□ 1.58
Shroom3Q9QXN0 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
Shroom3Q9QXN0 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC24.91■■□□□ 1.58
Shroom3Q9QXN0 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC24.9■■□□□ 1.58
Shroom3Q9QXN0 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
Shroom3Q9QXN0 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
Shroom3Q9QXN0 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC24.9■■□□□ 1.58
Shroom3Q9QXN0 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
Shroom3Q9QXN0 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC24.88■■□□□ 1.57
Shroom3Q9QXN0 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC24.88■■□□□ 1.57
Shroom3Q9QXN0 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC24.87■■□□□ 1.57
Shroom3Q9QXN0 Amer2-203ENSMUST00000225247 2662 ntBASIC24.87■■□□□ 1.57
Shroom3Q9QXN0 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC24.87■■□□□ 1.57
Shroom3Q9QXN0 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
Shroom3Q9QXN0 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
Shroom3Q9QXN0 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
Shroom3Q9QXN0 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC24.86■■□□□ 1.57
Shroom3Q9QXN0 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC24.86■■□□□ 1.57
Shroom3Q9QXN0 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
Shroom3Q9QXN0 AC157572.2-201ENSMUST00000226970 908 ntBASIC24.84■■□□□ 1.57
Shroom3Q9QXN0 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
Shroom3Q9QXN0 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.56
Shroom3Q9QXN0 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
Shroom3Q9QXN0 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
Shroom3Q9QXN0 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
Shroom3Q9QXN0 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC24.81■■□□□ 1.56
Shroom3Q9QXN0 Gm9939-201ENSMUST00000067161 1154 ntBASIC24.81■■□□□ 1.56
Shroom3Q9QXN0 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC24.81■■□□□ 1.56
Shroom3Q9QXN0 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
Shroom3Q9QXN0 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
Shroom3Q9QXN0 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC24.8■■□□□ 1.56
Shroom3Q9QXN0 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
Shroom3Q9QXN0 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
Shroom3Q9QXN0 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC24.78■■□□□ 1.56
Shroom3Q9QXN0 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
Retrieved 100 of 76,532 protein–RNA pairs in 16.6 ms