Protein–RNA interactions for Protein: Q9D9H3

Mbd3l1, Methyl-CpG-binding domain protein 3-like 1, mousemouse

Predictions only

Length 186 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mbd3l1Q9D9H3 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC21.43■■□□□ 1.02
Mbd3l1Q9D9H3 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Mbd3l1Q9D9H3 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Mbd3l1Q9D9H3 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC21.42■■□□□ 1.02
Mbd3l1Q9D9H3 Gm23366-201ENSMUST00000175022 89 ntBASIC21.42■■□□□ 1.02
Mbd3l1Q9D9H3 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Mbd3l1Q9D9H3 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC21.41■■□□□ 1.02
Mbd3l1Q9D9H3 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Mbd3l1Q9D9H3 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Mbd3l1Q9D9H3 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC21.4■■□□□ 1.02
Mbd3l1Q9D9H3 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC21.4■■□□□ 1.02
Mbd3l1Q9D9H3 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC21.4■■□□□ 1.02
Mbd3l1Q9D9H3 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Mbd3l1Q9D9H3 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Mbd3l1Q9D9H3 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Mbd3l1Q9D9H3 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Mbd3l1Q9D9H3 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Mbd3l1Q9D9H3 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Mbd3l1Q9D9H3 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Mbd3l1Q9D9H3 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Mbd3l1Q9D9H3 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
Mbd3l1Q9D9H3 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Mbd3l1Q9D9H3 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Mbd3l1Q9D9H3 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Mbd3l1Q9D9H3 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Mbd3l1Q9D9H3 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
Mbd3l1Q9D9H3 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Mbd3l1Q9D9H3 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
Mbd3l1Q9D9H3 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
Mbd3l1Q9D9H3 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC21.33■■□□□ 1.01
Mbd3l1Q9D9H3 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Mbd3l1Q9D9H3 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Mbd3l1Q9D9H3 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC21.32■■□□□ 1
Mbd3l1Q9D9H3 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC21.32■■□□□ 1
Mbd3l1Q9D9H3 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Mbd3l1Q9D9H3 Gm17641-201ENSMUST00000166328 2350 ntBASIC21.32■■□□□ 1
Mbd3l1Q9D9H3 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
Mbd3l1Q9D9H3 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Mbd3l1Q9D9H3 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC21.31■■□□□ 1
Mbd3l1Q9D9H3 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC21.31■■□□□ 1
Mbd3l1Q9D9H3 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC21.3■■□□□ 1
Mbd3l1Q9D9H3 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
Mbd3l1Q9D9H3 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Mbd3l1Q9D9H3 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Mbd3l1Q9D9H3 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC21.3■■□□□ 1
Mbd3l1Q9D9H3 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC21.29■■□□□ 1
Mbd3l1Q9D9H3 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC21.28■■□□□ 1
Mbd3l1Q9D9H3 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Mbd3l1Q9D9H3 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC21.27■■□□□ 1
Mbd3l1Q9D9H3 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC21.27■□□□□ 0.99
Mbd3l1Q9D9H3 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Mbd3l1Q9D9H3 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Mbd3l1Q9D9H3 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Mbd3l1Q9D9H3 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Mbd3l1Q9D9H3 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Mbd3l1Q9D9H3 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Mbd3l1Q9D9H3 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Mbd3l1Q9D9H3 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Mbd3l1Q9D9H3 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Mbd3l1Q9D9H3 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Mbd3l1Q9D9H3 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Mbd3l1Q9D9H3 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Mbd3l1Q9D9H3 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Mbd3l1Q9D9H3 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Mbd3l1Q9D9H3 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Mbd3l1Q9D9H3 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
Mbd3l1Q9D9H3 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
Mbd3l1Q9D9H3 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Mbd3l1Q9D9H3 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
Mbd3l1Q9D9H3 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Mbd3l1Q9D9H3 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Mbd3l1Q9D9H3 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Mbd3l1Q9D9H3 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Mbd3l1Q9D9H3 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Mbd3l1Q9D9H3 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC21.18■□□□□ 0.98
Mbd3l1Q9D9H3 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
Mbd3l1Q9D9H3 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Mbd3l1Q9D9H3 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Mbd3l1Q9D9H3 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Mbd3l1Q9D9H3 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
Mbd3l1Q9D9H3 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Mbd3l1Q9D9H3 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Mbd3l1Q9D9H3 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
Mbd3l1Q9D9H3 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Mbd3l1Q9D9H3 Il17rd-202ENSMUST00000223942 2186 ntBASIC21.14■□□□□ 0.98
Mbd3l1Q9D9H3 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC21.14■□□□□ 0.98
Mbd3l1Q9D9H3 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Mbd3l1Q9D9H3 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
Mbd3l1Q9D9H3 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Mbd3l1Q9D9H3 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Mbd3l1Q9D9H3 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC21.13■□□□□ 0.97
Mbd3l1Q9D9H3 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Mbd3l1Q9D9H3 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Mbd3l1Q9D9H3 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Mbd3l1Q9D9H3 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Mbd3l1Q9D9H3 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Mbd3l1Q9D9H3 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Mbd3l1Q9D9H3 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Mbd3l1Q9D9H3 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Mbd3l1Q9D9H3 AC122428.3-201ENSMUST00000215551 2290 ntBASIC21.1■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 47.3 ms