Protein–RNA interactions for Protein: Q9D361

Snrnp48, U11/U12 small nuclear ribonucleoprotein 48 kDa protein, mousemouse

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snrnp48Q9D361 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
Snrnp48Q9D361 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
Snrnp48Q9D361 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC24.8■■□□□ 1.56
Snrnp48Q9D361 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
Snrnp48Q9D361 Gm9905-201ENSMUST00000065740 1845 ntBASIC24.8■■□□□ 1.56
Snrnp48Q9D361 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
Snrnp48Q9D361 Tdp2-203ENSMUST00000223804 1136 ntBASIC24.79■■□□□ 1.56
Snrnp48Q9D361 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
Snrnp48Q9D361 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC24.78■■□□□ 1.56
Snrnp48Q9D361 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC24.78■■□□□ 1.56
Snrnp48Q9D361 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
Snrnp48Q9D361 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
Snrnp48Q9D361 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC24.75■■□□□ 1.55
Snrnp48Q9D361 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC24.75■■□□□ 1.55
Snrnp48Q9D361 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
Snrnp48Q9D361 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
Snrnp48Q9D361 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC24.75■■□□□ 1.55
Snrnp48Q9D361 Gm6206-201ENSMUST00000133472 2199 ntBASIC24.73■■□□□ 1.55
Snrnp48Q9D361 Gm43445-201ENSMUST00000198564 2091 ntBASIC24.73■■□□□ 1.55
Snrnp48Q9D361 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC24.72■■□□□ 1.55
Snrnp48Q9D361 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
Snrnp48Q9D361 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.55
Snrnp48Q9D361 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
Snrnp48Q9D361 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
Snrnp48Q9D361 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
Snrnp48Q9D361 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
Snrnp48Q9D361 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC24.68■■□□□ 1.54
Snrnp48Q9D361 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC24.67■■□□□ 1.54
Snrnp48Q9D361 Gm9397-201ENSMUST00000200125 605 ntBASIC24.67■■□□□ 1.54
Snrnp48Q9D361 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC24.65■■□□□ 1.54
Snrnp48Q9D361 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC24.64■■□□□ 1.54
Snrnp48Q9D361 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC24.64■■□□□ 1.54
Snrnp48Q9D361 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
Snrnp48Q9D361 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC24.63■■□□□ 1.53
Snrnp48Q9D361 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC24.62■■□□□ 1.53
Snrnp48Q9D361 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
Snrnp48Q9D361 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
Snrnp48Q9D361 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC24.61■■□□□ 1.53
Snrnp48Q9D361 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC24.58■■□□□ 1.53
Snrnp48Q9D361 Gm24970-201ENSMUST00000175582 82 ntBASIC24.58■■□□□ 1.53
Snrnp48Q9D361 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
Snrnp48Q9D361 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
Snrnp48Q9D361 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
Snrnp48Q9D361 Gm43863-201ENSMUST00000203822 1192 ntBASIC24.56■■□□□ 1.52
Snrnp48Q9D361 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
Snrnp48Q9D361 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC24.55■■□□□ 1.52
Snrnp48Q9D361 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC24.55■■□□□ 1.52
Snrnp48Q9D361 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC24.55■■□□□ 1.52
Snrnp48Q9D361 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC24.55■■□□□ 1.52
Snrnp48Q9D361 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC24.55■■□□□ 1.52
Snrnp48Q9D361 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC24.55■■□□□ 1.52
Snrnp48Q9D361 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
Snrnp48Q9D361 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC24.54■■□□□ 1.52
Snrnp48Q9D361 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC24.54■■□□□ 1.52
Snrnp48Q9D361 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
Snrnp48Q9D361 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC24.53■■□□□ 1.52
Snrnp48Q9D361 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC24.53■■□□□ 1.52
Snrnp48Q9D361 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC24.52■■□□□ 1.52
Snrnp48Q9D361 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC24.52■■□□□ 1.52
Snrnp48Q9D361 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
Snrnp48Q9D361 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC24.52■■□□□ 1.52
Snrnp48Q9D361 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
Snrnp48Q9D361 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC24.51■■□□□ 1.51
Snrnp48Q9D361 Gm45855-201ENSMUST00000212546 880 ntBASIC24.51■■□□□ 1.51
Snrnp48Q9D361 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
Snrnp48Q9D361 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
Snrnp48Q9D361 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
Snrnp48Q9D361 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC24.49■■□□□ 1.51
Snrnp48Q9D361 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC24.47■■□□□ 1.51
Snrnp48Q9D361 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Snrnp48Q9D361 AC157572.2-201ENSMUST00000226970 908 ntBASIC24.46■■□□□ 1.51
Snrnp48Q9D361 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
Snrnp48Q9D361 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC24.45■■□□□ 1.51
Snrnp48Q9D361 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC24.45■■□□□ 1.51
Snrnp48Q9D361 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC24.45■■□□□ 1.5
Snrnp48Q9D361 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC24.44■■□□□ 1.5
Snrnp48Q9D361 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC24.44■■□□□ 1.5
Snrnp48Q9D361 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC24.44■■□□□ 1.5
Snrnp48Q9D361 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
Snrnp48Q9D361 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC24.43■■□□□ 1.5
Snrnp48Q9D361 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Snrnp48Q9D361 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Snrnp48Q9D361 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC24.42■■□□□ 1.5
Snrnp48Q9D361 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
Snrnp48Q9D361 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Snrnp48Q9D361 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC24.4■■□□□ 1.5
Snrnp48Q9D361 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
Snrnp48Q9D361 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC24.39■■□□□ 1.49
Snrnp48Q9D361 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Snrnp48Q9D361 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
Snrnp48Q9D361 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC24.37■■□□□ 1.49
Snrnp48Q9D361 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Snrnp48Q9D361 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC24.37■■□□□ 1.49
Snrnp48Q9D361 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC24.37■■□□□ 1.49
Snrnp48Q9D361 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC24.36■■□□□ 1.49
Snrnp48Q9D361 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
Snrnp48Q9D361 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Snrnp48Q9D361 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
Snrnp48Q9D361 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Snrnp48Q9D361 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
Retrieved 100 of 76,532 protein–RNA pairs in 16.4 ms