Protein–RNA interactions for Protein: Q9CWU5

Khdc3, KH domain-containing protein 3, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Khdc3Q9CWU5 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC23,66■■□□□ 1,38
Khdc3Q9CWU5 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC23,65■■□□□ 1,38
Khdc3Q9CWU5 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC23,65■■□□□ 1,38
Khdc3Q9CWU5 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC23,64■■□□□ 1,37
Khdc3Q9CWU5 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC23,64■■□□□ 1,37
Khdc3Q9CWU5 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC23,62■■□□□ 1,37
Khdc3Q9CWU5 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC23,61■■□□□ 1,37
Khdc3Q9CWU5 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC23,61■■□□□ 1,37
Khdc3Q9CWU5 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC23,61■■□□□ 1,37
Khdc3Q9CWU5 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC23,61■■□□□ 1,37
Khdc3Q9CWU5 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC23,61■■□□□ 1,37
Khdc3Q9CWU5 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC23,6■■□□□ 1,37
Khdc3Q9CWU5 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC23,6■■□□□ 1,37
Khdc3Q9CWU5 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC23,59■■□□□ 1,37
Khdc3Q9CWU5 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC23,58■■□□□ 1,37
Khdc3Q9CWU5 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC23,58■■□□□ 1,37
Khdc3Q9CWU5 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC23,57■■□□□ 1,36
Khdc3Q9CWU5 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC23,57■■□□□ 1,36
Khdc3Q9CWU5 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC23,57■■□□□ 1,36
Khdc3Q9CWU5 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC23,57■■□□□ 1,36
Khdc3Q9CWU5 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC23,56■■□□□ 1,36
Khdc3Q9CWU5 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC23,56■■□□□ 1,36
Khdc3Q9CWU5 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC23,55■■□□□ 1,36
Khdc3Q9CWU5 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC23,54■■□□□ 1,36
Khdc3Q9CWU5 Zfp131-205ENSMUST00000223812 663 ntBASIC23,54■■□□□ 1,36
Khdc3Q9CWU5 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC23,54■■□□□ 1,36
Khdc3Q9CWU5 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC23,53■■□□□ 1,36
Khdc3Q9CWU5 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC23,53■■□□□ 1,36
Khdc3Q9CWU5 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC23,53■■□□□ 1,36
Khdc3Q9CWU5 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC23,53■■□□□ 1,36
Khdc3Q9CWU5 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC23,53■■□□□ 1,36
Khdc3Q9CWU5 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC23,52■■□□□ 1,36
Khdc3Q9CWU5 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC23,5■■□□□ 1,35
Khdc3Q9CWU5 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC23,5■■□□□ 1,35
Khdc3Q9CWU5 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC23,49■■□□□ 1,35
Khdc3Q9CWU5 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC23,48■■□□□ 1,35
Khdc3Q9CWU5 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC23,48■■□□□ 1,35
Khdc3Q9CWU5 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC23,48■■□□□ 1,35
Khdc3Q9CWU5 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC23,48■■□□□ 1,35
Khdc3Q9CWU5 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC23,48■■□□□ 1,35
Khdc3Q9CWU5 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC23,47■■□□□ 1,35
Khdc3Q9CWU5 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC23,47■■□□□ 1,35
Khdc3Q9CWU5 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC23,47■■□□□ 1,35
Khdc3Q9CWU5 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC23,46■■□□□ 1,35
Khdc3Q9CWU5 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC23,45■■□□□ 1,34
Khdc3Q9CWU5 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC23,45■■□□□ 1,34
Khdc3Q9CWU5 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC23,45■■□□□ 1,34
Khdc3Q9CWU5 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC23,45■■□□□ 1,34
Khdc3Q9CWU5 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC23,44■■□□□ 1,34
Khdc3Q9CWU5 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC23,43■■□□□ 1,34
Khdc3Q9CWU5 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC23,43■■□□□ 1,34
Khdc3Q9CWU5 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC23,43■■□□□ 1,34
Khdc3Q9CWU5 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC23,42■■□□□ 1,34
Khdc3Q9CWU5 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC23,42■■□□□ 1,34
Khdc3Q9CWU5 Amer2-203ENSMUST00000225247 2662 ntBASIC23,41■■□□□ 1,34
Khdc3Q9CWU5 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC23,41■■□□□ 1,34
Khdc3Q9CWU5 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC23,41■■□□□ 1,34
Khdc3Q9CWU5 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC23,41■■□□□ 1,34
Khdc3Q9CWU5 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC23,41■■□□□ 1,34
Khdc3Q9CWU5 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC23,4■■□□□ 1,34
Khdc3Q9CWU5 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC23,4■■□□□ 1,34
Khdc3Q9CWU5 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC23,37■■□□□ 1,33
Khdc3Q9CWU5 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC23,37■■□□□ 1,33
Khdc3Q9CWU5 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC23,37■■□□□ 1,33
Khdc3Q9CWU5 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC23,36■■□□□ 1,33
Khdc3Q9CWU5 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC23,36■■□□□ 1,33
Khdc3Q9CWU5 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC23,35■■□□□ 1,33
Khdc3Q9CWU5 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC23,35■■□□□ 1,33
Khdc3Q9CWU5 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC23,35■■□□□ 1,33
Khdc3Q9CWU5 Tdp2-203ENSMUST00000223804 1136 ntBASIC23,35■■□□□ 1,33
Khdc3Q9CWU5 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC23,35■■□□□ 1,33
Khdc3Q9CWU5 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC23,34■■□□□ 1,33
Khdc3Q9CWU5 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC23,33■■□□□ 1,32
Khdc3Q9CWU5 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC23,32■■□□□ 1,32
Khdc3Q9CWU5 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC23,32■■□□□ 1,32
Khdc3Q9CWU5 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC23,32■■□□□ 1,32
Khdc3Q9CWU5 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC23,3■■□□□ 1,32
Khdc3Q9CWU5 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC23,3■■□□□ 1,32
Khdc3Q9CWU5 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC23,3■■□□□ 1,32
Khdc3Q9CWU5 Gm9397-201ENSMUST00000200125 605 ntBASIC23,28■■□□□ 1,32
Khdc3Q9CWU5 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC23,28■■□□□ 1,32
Khdc3Q9CWU5 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC23,27■■□□□ 1,32
Khdc3Q9CWU5 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC23,27■■□□□ 1,32
Khdc3Q9CWU5 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC23,27■■□□□ 1,32
Khdc3Q9CWU5 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC23,26■■□□□ 1,31
Khdc3Q9CWU5 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC23,26■■□□□ 1,31
Khdc3Q9CWU5 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC23,26■■□□□ 1,31
Khdc3Q9CWU5 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC23,26■■□□□ 1,31
Khdc3Q9CWU5 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC23,26■■□□□ 1,31
Khdc3Q9CWU5 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC23,25■■□□□ 1,31
Khdc3Q9CWU5 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC23,25■■□□□ 1,31
Khdc3Q9CWU5 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC23,24■■□□□ 1,31
Khdc3Q9CWU5 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC23,24■■□□□ 1,31
Khdc3Q9CWU5 Gm43863-201ENSMUST00000203822 1192 ntBASIC23,24■■□□□ 1,31
Khdc3Q9CWU5 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC23,23■■□□□ 1,31
Khdc3Q9CWU5 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC23,23■■□□□ 1,31
Khdc3Q9CWU5 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC23,23■■□□□ 1,31
Khdc3Q9CWU5 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC23,23■■□□□ 1,31
Khdc3Q9CWU5 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC23,23■■□□□ 1,31
Khdc3Q9CWU5 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC23,22■■□□□ 1,31
Retrieved 100 of 76,532 protein–RNA pairs in 11,2 ms