Protein–RNA interactions for Protein: Q9CQ90

Uncharacterized protein C9orf85 homolog, mousemouse

Predictions only

Length 155 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q9CQ90 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC20.88■□□□□ 0.93
Q9CQ90 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Q9CQ90 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Q9CQ90 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Q9CQ90 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Q9CQ90 Gm30346-201ENSMUST00000218641 1699 ntBASIC20.86■□□□□ 0.93
Q9CQ90 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Q9CQ90 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Q9CQ90 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
Q9CQ90 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC20.85■□□□□ 0.93
Q9CQ90 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Q9CQ90 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Q9CQ90 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Q9CQ90 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Q9CQ90 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC20.83■□□□□ 0.92
Q9CQ90 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Q9CQ90 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Q9CQ90 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Q9CQ90 Gm43863-201ENSMUST00000203822 1192 ntBASIC20.81■□□□□ 0.92
Q9CQ90 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Q9CQ90 Gm6345-201ENSMUST00000180378 1691 ntBASIC20.79■□□□□ 0.92
Q9CQ90 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
Q9CQ90 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Q9CQ90 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Q9CQ90 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Q9CQ90 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Q9CQ90 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC20.78■□□□□ 0.92
Q9CQ90 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Q9CQ90 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Q9CQ90 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC20.76■□□□□ 0.91
Q9CQ90 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Q9CQ90 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Q9CQ90 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Q9CQ90 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC20.73■□□□□ 0.91
Q9CQ90 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
Q9CQ90 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Q9CQ90 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Q9CQ90 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
Q9CQ90 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
Q9CQ90 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Q9CQ90 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Q9CQ90 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Q9CQ90 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
Q9CQ90 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Q9CQ90 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Q9CQ90 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Q9CQ90 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Q9CQ90 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Q9CQ90 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
Q9CQ90 AC157572.2-201ENSMUST00000226970 908 ntBASIC20.68■□□□□ 0.9
Q9CQ90 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Q9CQ90 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC20.68■□□□□ 0.9
Q9CQ90 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Q9CQ90 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Q9CQ90 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Q9CQ90 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC20.67■□□□□ 0.9
Q9CQ90 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Q9CQ90 Zxda-201ENSMUST00000117281 2621 ntBASIC20.67■□□□□ 0.9
Q9CQ90 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
Q9CQ90 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Q9CQ90 Gm44487-201ENSMUST00000205145 325 ntBASIC20.64■□□□□ 0.89
Q9CQ90 Gm9939-201ENSMUST00000067161 1154 ntBASIC20.64■□□□□ 0.89
Q9CQ90 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Q9CQ90 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Q9CQ90 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
Q9CQ90 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Q9CQ90 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Q9CQ90 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Q9CQ90 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Q9CQ90 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
Q9CQ90 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Q9CQ90 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC20.6■□□□□ 0.89
Q9CQ90 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
Q9CQ90 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Q9CQ90 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Q9CQ90 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Q9CQ90 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Q9CQ90 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Q9CQ90 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
Q9CQ90 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Q9CQ90 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC20.58■□□□□ 0.88
Q9CQ90 Gm9905-201ENSMUST00000065740 1845 ntBASIC20.57■□□□□ 0.88
Q9CQ90 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Q9CQ90 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
Q9CQ90 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
Q9CQ90 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Q9CQ90 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Q9CQ90 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC20.54■□□□□ 0.88
Q9CQ90 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Q9CQ90 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Q9CQ90 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Q9CQ90 Gm6821-201ENSMUST00000107540 542 ntBASIC20.53■□□□□ 0.88
Q9CQ90 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Q9CQ90 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Q9CQ90 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC20.52■□□□□ 0.88
Q9CQ90 Gm43445-201ENSMUST00000198564 2091 ntBASIC20.52■□□□□ 0.87
Q9CQ90 Gm6206-201ENSMUST00000133472 2199 ntBASIC20.51■□□□□ 0.87
Q9CQ90 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Q9CQ90 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Q9CQ90 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 53.9 ms