Protein–RNA interactions for Protein: Q9CQ70

H2afb1, Histone H2A-Bbd type 1, mousemouse

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb1Q9CQ70 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
H2afb1Q9CQ70 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
H2afb1Q9CQ70 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
H2afb1Q9CQ70 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
H2afb1Q9CQ70 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
H2afb1Q9CQ70 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
H2afb1Q9CQ70 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
H2afb1Q9CQ70 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
H2afb1Q9CQ70 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
H2afb1Q9CQ70 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
H2afb1Q9CQ70 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
H2afb1Q9CQ70 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC20.2■□□□□ 0.82
H2afb1Q9CQ70 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
H2afb1Q9CQ70 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
H2afb1Q9CQ70 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
H2afb1Q9CQ70 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
H2afb1Q9CQ70 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC20.18■□□□□ 0.82
H2afb1Q9CQ70 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
H2afb1Q9CQ70 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
H2afb1Q9CQ70 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
H2afb1Q9CQ70 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC20.17■□□□□ 0.82
H2afb1Q9CQ70 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC20.16■□□□□ 0.82
H2afb1Q9CQ70 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC20.16■□□□□ 0.82
H2afb1Q9CQ70 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
H2afb1Q9CQ70 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
H2afb1Q9CQ70 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
H2afb1Q9CQ70 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
H2afb1Q9CQ70 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
H2afb1Q9CQ70 Fezf2-202ENSMUST00000224023 1917 ntBASIC20.14■□□□□ 0.81
H2afb1Q9CQ70 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
H2afb1Q9CQ70 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
H2afb1Q9CQ70 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC20.12■□□□□ 0.81
H2afb1Q9CQ70 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
H2afb1Q9CQ70 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC20.11■□□□□ 0.81
H2afb1Q9CQ70 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
H2afb1Q9CQ70 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
H2afb1Q9CQ70 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
H2afb1Q9CQ70 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
H2afb1Q9CQ70 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC20.1■□□□□ 0.81
H2afb1Q9CQ70 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC20.1■□□□□ 0.81
H2afb1Q9CQ70 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
H2afb1Q9CQ70 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
H2afb1Q9CQ70 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
H2afb1Q9CQ70 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
H2afb1Q9CQ70 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
H2afb1Q9CQ70 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
H2afb1Q9CQ70 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
H2afb1Q9CQ70 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
H2afb1Q9CQ70 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
H2afb1Q9CQ70 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
H2afb1Q9CQ70 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
H2afb1Q9CQ70 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
H2afb1Q9CQ70 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
H2afb1Q9CQ70 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
H2afb1Q9CQ70 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
H2afb1Q9CQ70 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC20.04■□□□□ 0.8
H2afb1Q9CQ70 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC20.04■□□□□ 0.8
H2afb1Q9CQ70 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC20.04■□□□□ 0.8
H2afb1Q9CQ70 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
H2afb1Q9CQ70 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
H2afb1Q9CQ70 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
H2afb1Q9CQ70 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
H2afb1Q9CQ70 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
H2afb1Q9CQ70 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
H2afb1Q9CQ70 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC20■□□□□ 0.79
H2afb1Q9CQ70 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
H2afb1Q9CQ70 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
H2afb1Q9CQ70 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
H2afb1Q9CQ70 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
H2afb1Q9CQ70 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
H2afb1Q9CQ70 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC19.99■□□□□ 0.79
H2afb1Q9CQ70 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
H2afb1Q9CQ70 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
H2afb1Q9CQ70 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
H2afb1Q9CQ70 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
H2afb1Q9CQ70 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
H2afb1Q9CQ70 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC19.96■□□□□ 0.79
H2afb1Q9CQ70 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
H2afb1Q9CQ70 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
H2afb1Q9CQ70 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC19.95■□□□□ 0.78
H2afb1Q9CQ70 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
H2afb1Q9CQ70 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
H2afb1Q9CQ70 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
H2afb1Q9CQ70 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
H2afb1Q9CQ70 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
H2afb1Q9CQ70 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC19.94■□□□□ 0.78
H2afb1Q9CQ70 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
H2afb1Q9CQ70 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
H2afb1Q9CQ70 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
H2afb1Q9CQ70 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
H2afb1Q9CQ70 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
H2afb1Q9CQ70 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
H2afb1Q9CQ70 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
H2afb1Q9CQ70 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC19.91■□□□□ 0.78
H2afb1Q9CQ70 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
H2afb1Q9CQ70 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
H2afb1Q9CQ70 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
H2afb1Q9CQ70 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
H2afb1Q9CQ70 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC19.89■□□□□ 0.77
H2afb1Q9CQ70 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 55.4 ms