Protein–RNA interactions for Protein: Q99NE9

Pbx4, Pre-B-cell leukemia transcription factor 4, mousemouse

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pbx4Q99NE9 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC28.61■■■□□ 2.17
Pbx4Q99NE9 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC28.6■■■□□ 2.17
Pbx4Q99NE9 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC28.59■■■□□ 2.17
Pbx4Q99NE9 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC28.58■■■□□ 2.17
Pbx4Q99NE9 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC28.56■■■□□ 2.16
Pbx4Q99NE9 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC28.55■■■□□ 2.16
Pbx4Q99NE9 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC28.53■■■□□ 2.16
Pbx4Q99NE9 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC28.51■■■□□ 2.15
Pbx4Q99NE9 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC28.5■■■□□ 2.15
Pbx4Q99NE9 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC28.46■■■□□ 2.15
Pbx4Q99NE9 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC28.44■■■□□ 2.14
Pbx4Q99NE9 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC28.44■■■□□ 2.14
Pbx4Q99NE9 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC28.44■■■□□ 2.14
Pbx4Q99NE9 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC28.43■■■□□ 2.14
Pbx4Q99NE9 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
Pbx4Q99NE9 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
Pbx4Q99NE9 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC28.43■■■□□ 2.14
Pbx4Q99NE9 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC28.42■■■□□ 2.14
Pbx4Q99NE9 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
Pbx4Q99NE9 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
Pbx4Q99NE9 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC28.4■■■□□ 2.14
Pbx4Q99NE9 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC28.39■■■□□ 2.14
Pbx4Q99NE9 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.14
Pbx4Q99NE9 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC28.39■■■□□ 2.14
Pbx4Q99NE9 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC28.39■■■□□ 2.14
Pbx4Q99NE9 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC28.39■■■□□ 2.14
Pbx4Q99NE9 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC28.38■■■□□ 2.13
Pbx4Q99NE9 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
Pbx4Q99NE9 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC28.37■■■□□ 2.13
Pbx4Q99NE9 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
Pbx4Q99NE9 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC28.35■■■□□ 2.13
Pbx4Q99NE9 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC28.35■■■□□ 2.13
Pbx4Q99NE9 Gm6311-201ENSMUST00000073790 878 ntBASIC28.35■■■□□ 2.13
Pbx4Q99NE9 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC28.34■■■□□ 2.13
Pbx4Q99NE9 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC28.34■■■□□ 2.13
Pbx4Q99NE9 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC28.33■■■□□ 2.13
Pbx4Q99NE9 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC28.33■■■□□ 2.13
Pbx4Q99NE9 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC28.33■■■□□ 2.13
Pbx4Q99NE9 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC28.3■■■□□ 2.12
Pbx4Q99NE9 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC28.29■■■□□ 2.12
Pbx4Q99NE9 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
Pbx4Q99NE9 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC28.29■■■□□ 2.12
Pbx4Q99NE9 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC28.28■■■□□ 2.12
Pbx4Q99NE9 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC28.28■■■□□ 2.12
Pbx4Q99NE9 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC28.25■■■□□ 2.11
Pbx4Q99NE9 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC28.25■■■□□ 2.11
Pbx4Q99NE9 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC28.25■■■□□ 2.11
Pbx4Q99NE9 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC28.25■■■□□ 2.11
Pbx4Q99NE9 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC28.24■■■□□ 2.11
Pbx4Q99NE9 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC28.23■■■□□ 2.11
Pbx4Q99NE9 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC28.23■■■□□ 2.11
Pbx4Q99NE9 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
Pbx4Q99NE9 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC28.22■■■□□ 2.11
Pbx4Q99NE9 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC28.21■■■□□ 2.11
Pbx4Q99NE9 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC28.21■■■□□ 2.11
Pbx4Q99NE9 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
Pbx4Q99NE9 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC28.2■■■□□ 2.1
Pbx4Q99NE9 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC28.2■■■□□ 2.1
Pbx4Q99NE9 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC28.2■■■□□ 2.1
Pbx4Q99NE9 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC28.19■■■□□ 2.1
Pbx4Q99NE9 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC28.18■■■□□ 2.1
Pbx4Q99NE9 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC28.18■■■□□ 2.1
Pbx4Q99NE9 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
Pbx4Q99NE9 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
Pbx4Q99NE9 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
Pbx4Q99NE9 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC28.15■■■□□ 2.1
Pbx4Q99NE9 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.1
Pbx4Q99NE9 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC28.14■■■□□ 2.1
Pbx4Q99NE9 AC167019.3-201ENSMUST00000228225 1266 ntBASIC28.14■■■□□ 2.1
Pbx4Q99NE9 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.1
Pbx4Q99NE9 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.09
Pbx4Q99NE9 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC28.13■■■□□ 2.09
Pbx4Q99NE9 Gm22567-201ENSMUST00000175542 342 ntBASIC28.11■■■□□ 2.09
Pbx4Q99NE9 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC28.09■■■□□ 2.09
Pbx4Q99NE9 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC28.09■■■□□ 2.09
Pbx4Q99NE9 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
Pbx4Q99NE9 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
Pbx4Q99NE9 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC28.07■■■□□ 2.08
Pbx4Q99NE9 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC28.07■■■□□ 2.08
Pbx4Q99NE9 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC28.07■■■□□ 2.08
Pbx4Q99NE9 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC28.07■■■□□ 2.08
Pbx4Q99NE9 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC28.06■■■□□ 2.08
Pbx4Q99NE9 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC28.06■■■□□ 2.08
Pbx4Q99NE9 Gm12366-201ENSMUST00000121722 873 ntBASIC28.06■■■□□ 2.08
Pbx4Q99NE9 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC28.06■■■□□ 2.08
Pbx4Q99NE9 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC28.06■■■□□ 2.08
Pbx4Q99NE9 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC28.06■■■□□ 2.08
Pbx4Q99NE9 Gm5786-201ENSMUST00000085368 882 ntBASIC28.06■■■□□ 2.08
Pbx4Q99NE9 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC28.06■■■□□ 2.08
Pbx4Q99NE9 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC28.05■■■□□ 2.08
Pbx4Q99NE9 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC28.05■■■□□ 2.08
Pbx4Q99NE9 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC28.05■■■□□ 2.08
Pbx4Q99NE9 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC28.05■■■□□ 2.08
Pbx4Q99NE9 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
Pbx4Q99NE9 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
Pbx4Q99NE9 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC28.04■■■□□ 2.08
Pbx4Q99NE9 AC131739.1-201ENSMUST00000221692 1245 ntBASIC28.03■■■□□ 2.08
Pbx4Q99NE9 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC28.03■■■□□ 2.08
Pbx4Q99NE9 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC28.02■■■□□ 2.08
Pbx4Q99NE9 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC28.02■■■□□ 2.08
Retrieved 100 of 76,532 protein–RNA pairs in 13.7 ms