Protein–RNA interactions for Protein: Q99N57

Raf1, RAF proto-oncogene serine/threonine-protein kinase, mousemouse

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Raf1Q99N57 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC21.95■■□□□ 1.1
Raf1Q99N57 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Raf1Q99N57 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Raf1Q99N57 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC21.92■■□□□ 1.1
Raf1Q99N57 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Raf1Q99N57 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Raf1Q99N57 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Raf1Q99N57 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Raf1Q99N57 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC21.91■■□□□ 1.1
Raf1Q99N57 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Raf1Q99N57 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Raf1Q99N57 Tdp2-203ENSMUST00000223804 1136 ntBASIC21.9■■□□□ 1.1
Raf1Q99N57 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC21.89■■□□□ 1.1
Raf1Q99N57 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
Raf1Q99N57 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC21.89■■□□□ 1.09
Raf1Q99N57 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC21.89■■□□□ 1.09
Raf1Q99N57 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC21.89■■□□□ 1.09
Raf1Q99N57 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC21.88■■□□□ 1.09
Raf1Q99N57 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Raf1Q99N57 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
Raf1Q99N57 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC21.87■■□□□ 1.09
Raf1Q99N57 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Raf1Q99N57 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Raf1Q99N57 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC21.85■■□□□ 1.09
Raf1Q99N57 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC21.85■■□□□ 1.09
Raf1Q99N57 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Raf1Q99N57 Gm30346-201ENSMUST00000218641 1699 ntBASIC21.84■■□□□ 1.09
Raf1Q99N57 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Raf1Q99N57 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC21.83■■□□□ 1.08
Raf1Q99N57 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC21.83■■□□□ 1.08
Raf1Q99N57 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC21.82■■□□□ 1.08
Raf1Q99N57 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC21.82■■□□□ 1.08
Raf1Q99N57 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Raf1Q99N57 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Raf1Q99N57 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC21.81■■□□□ 1.08
Raf1Q99N57 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Raf1Q99N57 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Raf1Q99N57 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Raf1Q99N57 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Raf1Q99N57 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Raf1Q99N57 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Raf1Q99N57 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Raf1Q99N57 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
Raf1Q99N57 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
Raf1Q99N57 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC21.77■■□□□ 1.08
Raf1Q99N57 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Raf1Q99N57 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC21.76■■□□□ 1.07
Raf1Q99N57 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Raf1Q99N57 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC21.76■■□□□ 1.07
Raf1Q99N57 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Raf1Q99N57 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Raf1Q99N57 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Raf1Q99N57 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Raf1Q99N57 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Raf1Q99N57 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Raf1Q99N57 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Raf1Q99N57 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Raf1Q99N57 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Raf1Q99N57 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Raf1Q99N57 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC21.73■■□□□ 1.07
Raf1Q99N57 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC21.73■■□□□ 1.07
Raf1Q99N57 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Raf1Q99N57 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Raf1Q99N57 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Raf1Q99N57 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Raf1Q99N57 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
Raf1Q99N57 Peli2-204ENSMUST00000226513 1320 ntBASIC21.71■■□□□ 1.07
Raf1Q99N57 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Raf1Q99N57 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Raf1Q99N57 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Raf1Q99N57 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
Raf1Q99N57 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Raf1Q99N57 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Raf1Q99N57 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Raf1Q99N57 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Raf1Q99N57 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Raf1Q99N57 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC21.67■■□□□ 1.06
Raf1Q99N57 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
Raf1Q99N57 AC153890.1-201ENSMUST00000220021 2469 ntBASIC21.66■■□□□ 1.06
Raf1Q99N57 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC21.66■■□□□ 1.06
Raf1Q99N57 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Raf1Q99N57 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Raf1Q99N57 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Raf1Q99N57 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
Raf1Q99N57 Gm45855-201ENSMUST00000212546 880 ntBASIC21.63■■□□□ 1.05
Raf1Q99N57 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Raf1Q99N57 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Raf1Q99N57 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Raf1Q99N57 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
Raf1Q99N57 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Raf1Q99N57 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
Raf1Q99N57 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC21.6■■□□□ 1.05
Raf1Q99N57 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC21.6■■□□□ 1.05
Raf1Q99N57 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Raf1Q99N57 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Raf1Q99N57 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC21.58■■□□□ 1.05
Raf1Q99N57 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC21.58■■□□□ 1.05
Raf1Q99N57 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Raf1Q99N57 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Raf1Q99N57 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Retrieved 100 of 76,532 protein–RNA pairs in 195.2 ms