Protein–RNA interactions for Protein: Q99MQ5

Col25a1, Collagen alpha-1(XXV) chain, mousemouse

Predictions only

Length 666 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col25a1Q99MQ5 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC26.26■■□□□ 1.79
Col25a1Q99MQ5 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC26.26■■□□□ 1.79
Col25a1Q99MQ5 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
Col25a1Q99MQ5 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
Col25a1Q99MQ5 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC26.25■■□□□ 1.79
Col25a1Q99MQ5 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC26.24■■□□□ 1.79
Col25a1Q99MQ5 AC157572.2-201ENSMUST00000226970 908 ntBASIC26.23■■□□□ 1.79
Col25a1Q99MQ5 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
Col25a1Q99MQ5 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
Col25a1Q99MQ5 Zfp131-207ENSMUST00000224946 1783 ntBASIC26.2■■□□□ 1.79
Col25a1Q99MQ5 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC26.19■■□□□ 1.78
Col25a1Q99MQ5 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC26.19■■□□□ 1.78
Col25a1Q99MQ5 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC26.18■■□□□ 1.78
Col25a1Q99MQ5 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC26.18■■□□□ 1.78
Col25a1Q99MQ5 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC26.17■■□□□ 1.78
Col25a1Q99MQ5 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC26.17■■□□□ 1.78
Col25a1Q99MQ5 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
Col25a1Q99MQ5 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
Col25a1Q99MQ5 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
Col25a1Q99MQ5 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC26.14■■□□□ 1.78
Col25a1Q99MQ5 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC26.14■■□□□ 1.78
Col25a1Q99MQ5 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
Col25a1Q99MQ5 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC26.14■■□□□ 1.77
Col25a1Q99MQ5 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC26.13■■□□□ 1.77
Col25a1Q99MQ5 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
Col25a1Q99MQ5 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
Col25a1Q99MQ5 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
Col25a1Q99MQ5 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
Col25a1Q99MQ5 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
Col25a1Q99MQ5 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
Col25a1Q99MQ5 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC26.1■■□□□ 1.77
Col25a1Q99MQ5 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC26.09■■□□□ 1.77
Col25a1Q99MQ5 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
Col25a1Q99MQ5 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC26.09■■□□□ 1.77
Col25a1Q99MQ5 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC26.08■■□□□ 1.77
Col25a1Q99MQ5 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC26.07■■□□□ 1.76
Col25a1Q99MQ5 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC26.06■■□□□ 1.76
Col25a1Q99MQ5 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
Col25a1Q99MQ5 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC26.05■■□□□ 1.76
Col25a1Q99MQ5 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC26.05■■□□□ 1.76
Col25a1Q99MQ5 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
Col25a1Q99MQ5 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
Col25a1Q99MQ5 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
Col25a1Q99MQ5 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
Col25a1Q99MQ5 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC26.04■■□□□ 1.76
Col25a1Q99MQ5 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
Col25a1Q99MQ5 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC26.02■■□□□ 1.76
Col25a1Q99MQ5 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC26.02■■□□□ 1.76
Col25a1Q99MQ5 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC26.01■■□□□ 1.75
Col25a1Q99MQ5 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC26.01■■□□□ 1.75
Col25a1Q99MQ5 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC26■■□□□ 1.75
Col25a1Q99MQ5 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC25.98■■□□□ 1.75
Col25a1Q99MQ5 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
Col25a1Q99MQ5 Gm6311-201ENSMUST00000073790 878 ntBASIC25.97■■□□□ 1.75
Col25a1Q99MQ5 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
Col25a1Q99MQ5 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC25.94■■□□□ 1.74
Col25a1Q99MQ5 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC25.93■■□□□ 1.74
Col25a1Q99MQ5 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
Col25a1Q99MQ5 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC25.92■■□□□ 1.74
Col25a1Q99MQ5 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
Col25a1Q99MQ5 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC25.9■■□□□ 1.74
Col25a1Q99MQ5 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
Col25a1Q99MQ5 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
Col25a1Q99MQ5 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC25.89■■□□□ 1.74
Col25a1Q99MQ5 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC25.88■■□□□ 1.73
Col25a1Q99MQ5 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
Col25a1Q99MQ5 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
Col25a1Q99MQ5 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
Col25a1Q99MQ5 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC25.87■■□□□ 1.73
Col25a1Q99MQ5 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC25.87■■□□□ 1.73
Col25a1Q99MQ5 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC25.86■■□□□ 1.73
Col25a1Q99MQ5 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
Col25a1Q99MQ5 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC25.86■■□□□ 1.73
Col25a1Q99MQ5 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC25.85■■□□□ 1.73
Col25a1Q99MQ5 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC25.84■■□□□ 1.73
Col25a1Q99MQ5 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
Col25a1Q99MQ5 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
Col25a1Q99MQ5 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC25.81■■□□□ 1.72
Col25a1Q99MQ5 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
Col25a1Q99MQ5 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC25.8■■□□□ 1.72
Col25a1Q99MQ5 Gm12366-201ENSMUST00000121722 873 ntBASIC25.8■■□□□ 1.72
Col25a1Q99MQ5 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC25.8■■□□□ 1.72
Col25a1Q99MQ5 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC25.8■■□□□ 1.72
Col25a1Q99MQ5 Gm5786-201ENSMUST00000085368 882 ntBASIC25.8■■□□□ 1.72
Col25a1Q99MQ5 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
Col25a1Q99MQ5 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC25.78■■□□□ 1.72
Col25a1Q99MQ5 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC25.78■■□□□ 1.72
Col25a1Q99MQ5 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
Col25a1Q99MQ5 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
Col25a1Q99MQ5 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC25.78■■□□□ 1.72
Col25a1Q99MQ5 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC25.77■■□□□ 1.72
Col25a1Q99MQ5 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
Col25a1Q99MQ5 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC25.76■■□□□ 1.71
Col25a1Q99MQ5 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
Col25a1Q99MQ5 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
Col25a1Q99MQ5 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC25.75■■□□□ 1.71
Col25a1Q99MQ5 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC25.74■■□□□ 1.71
Col25a1Q99MQ5 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC25.72■■□□□ 1.71
Col25a1Q99MQ5 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
Col25a1Q99MQ5 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC25.71■■□□□ 1.71
Retrieved 100 of 76,532 protein–RNA pairs in 11 ms