Protein–RNA interactions for Protein: Q99ML9

Rnf111, E3 ubiquitin-protein ligase Arkadia, mousemouse

Predictions only

Length 989 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf111Q99ML9 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC23.97■■□□□ 1.43
Rnf111Q99ML9 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
Rnf111Q99ML9 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC23.96■■□□□ 1.43
Rnf111Q99ML9 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Rnf111Q99ML9 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Rnf111Q99ML9 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC23.96■■□□□ 1.43
Rnf111Q99ML9 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Rnf111Q99ML9 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC23.95■■□□□ 1.43
Rnf111Q99ML9 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
Rnf111Q99ML9 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
Rnf111Q99ML9 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
Rnf111Q99ML9 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC23.92■■□□□ 1.42
Rnf111Q99ML9 Gm16148-201ENSMUST00000119653 893 ntBASIC23.92■■□□□ 1.42
Rnf111Q99ML9 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC23.92■■□□□ 1.42
Rnf111Q99ML9 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC23.92■■□□□ 1.42
Rnf111Q99ML9 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Rnf111Q99ML9 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Rnf111Q99ML9 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Rnf111Q99ML9 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
Rnf111Q99ML9 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
Rnf111Q99ML9 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
Rnf111Q99ML9 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
Rnf111Q99ML9 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
Rnf111Q99ML9 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
Rnf111Q99ML9 AC153890.1-201ENSMUST00000220021 2469 ntBASIC23.88■■□□□ 1.41
Rnf111Q99ML9 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Rnf111Q99ML9 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC23.88■■□□□ 1.41
Rnf111Q99ML9 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Rnf111Q99ML9 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC23.86■■□□□ 1.41
Rnf111Q99ML9 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC23.86■■□□□ 1.41
Rnf111Q99ML9 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Rnf111Q99ML9 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC23.85■■□□□ 1.41
Rnf111Q99ML9 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Rnf111Q99ML9 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Rnf111Q99ML9 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Rnf111Q99ML9 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Rnf111Q99ML9 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC23.84■■□□□ 1.41
Rnf111Q99ML9 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC23.83■■□□□ 1.41
Rnf111Q99ML9 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC23.83■■□□□ 1.41
Rnf111Q99ML9 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC23.83■■□□□ 1.41
Rnf111Q99ML9 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
Rnf111Q99ML9 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC23.83■■□□□ 1.41
Rnf111Q99ML9 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
Rnf111Q99ML9 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
Rnf111Q99ML9 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Rnf111Q99ML9 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Rnf111Q99ML9 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Rnf111Q99ML9 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Rnf111Q99ML9 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC23.77■■□□□ 1.4
Rnf111Q99ML9 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Rnf111Q99ML9 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC23.76■■□□□ 1.39
Rnf111Q99ML9 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC23.76■■□□□ 1.39
Rnf111Q99ML9 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Rnf111Q99ML9 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC23.74■■□□□ 1.39
Rnf111Q99ML9 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Rnf111Q99ML9 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Rnf111Q99ML9 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Rnf111Q99ML9 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
Rnf111Q99ML9 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
Rnf111Q99ML9 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Rnf111Q99ML9 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC23.72■■□□□ 1.39
Rnf111Q99ML9 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC23.72■■□□□ 1.39
Rnf111Q99ML9 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
Rnf111Q99ML9 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC23.72■■□□□ 1.39
Rnf111Q99ML9 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
Rnf111Q99ML9 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Rnf111Q99ML9 Gm30346-201ENSMUST00000218641 1699 ntBASIC23.7■■□□□ 1.39
Rnf111Q99ML9 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Rnf111Q99ML9 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
Rnf111Q99ML9 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Rnf111Q99ML9 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC23.67■■□□□ 1.38
Rnf111Q99ML9 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
Rnf111Q99ML9 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Rnf111Q99ML9 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Rnf111Q99ML9 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Rnf111Q99ML9 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC23.66■■□□□ 1.38
Rnf111Q99ML9 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
Rnf111Q99ML9 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC23.64■■□□□ 1.38
Rnf111Q99ML9 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
Rnf111Q99ML9 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
Rnf111Q99ML9 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Rnf111Q99ML9 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC23.63■■□□□ 1.37
Rnf111Q99ML9 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC23.63■■□□□ 1.37
Rnf111Q99ML9 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
Rnf111Q99ML9 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
Rnf111Q99ML9 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Rnf111Q99ML9 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC23.61■■□□□ 1.37
Rnf111Q99ML9 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC23.61■■□□□ 1.37
Rnf111Q99ML9 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC23.6■■□□□ 1.37
Rnf111Q99ML9 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Rnf111Q99ML9 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC23.6■■□□□ 1.37
Rnf111Q99ML9 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
Rnf111Q99ML9 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC23.59■■□□□ 1.37
Rnf111Q99ML9 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC23.59■■□□□ 1.37
Rnf111Q99ML9 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
Rnf111Q99ML9 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.36
Rnf111Q99ML9 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Rnf111Q99ML9 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC23.56■■□□□ 1.36
Rnf111Q99ML9 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC23.56■■□□□ 1.36
Rnf111Q99ML9 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC23.55■■□□□ 1.36
Retrieved 100 of 76,532 protein–RNA pairs in 46.2 ms