Protein–RNA interactions for Protein: Q99MB1

Tlr3, Toll-like receptor 3, mousemouse

Predictions only

Length 905 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tlr3Q99MB1 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC26.73■■□□□ 1.87
Tlr3Q99MB1 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC26.73■■□□□ 1.87
Tlr3Q99MB1 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
Tlr3Q99MB1 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
Tlr3Q99MB1 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC26.7■■□□□ 1.87
Tlr3Q99MB1 Gm45855-201ENSMUST00000212546 880 ntBASIC26.7■■□□□ 1.86
Tlr3Q99MB1 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC26.7■■□□□ 1.86
Tlr3Q99MB1 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC26.7■■□□□ 1.86
Tlr3Q99MB1 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
Tlr3Q99MB1 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
Tlr3Q99MB1 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC26.66■■□□□ 1.86
Tlr3Q99MB1 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
Tlr3Q99MB1 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC26.65■■□□□ 1.86
Tlr3Q99MB1 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC26.65■■□□□ 1.86
Tlr3Q99MB1 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
Tlr3Q99MB1 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC26.64■■□□□ 1.86
Tlr3Q99MB1 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.85
Tlr3Q99MB1 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.85
Tlr3Q99MB1 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
Tlr3Q99MB1 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
Tlr3Q99MB1 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC26.62■■□□□ 1.85
Tlr3Q99MB1 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
Tlr3Q99MB1 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC26.61■■□□□ 1.85
Tlr3Q99MB1 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC26.6■■□□□ 1.85
Tlr3Q99MB1 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
Tlr3Q99MB1 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
Tlr3Q99MB1 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
Tlr3Q99MB1 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC26.57■■□□□ 1.84
Tlr3Q99MB1 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
Tlr3Q99MB1 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC26.57■■□□□ 1.84
Tlr3Q99MB1 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC26.56■■□□□ 1.84
Tlr3Q99MB1 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC26.56■■□□□ 1.84
Tlr3Q99MB1 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
Tlr3Q99MB1 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
Tlr3Q99MB1 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
Tlr3Q99MB1 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
Tlr3Q99MB1 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
Tlr3Q99MB1 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
Tlr3Q99MB1 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC26.54■■□□□ 1.84
Tlr3Q99MB1 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC26.53■■□□□ 1.84
Tlr3Q99MB1 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
Tlr3Q99MB1 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
Tlr3Q99MB1 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC26.51■■□□□ 1.83
Tlr3Q99MB1 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
Tlr3Q99MB1 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
Tlr3Q99MB1 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
Tlr3Q99MB1 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC26.49■■□□□ 1.83
Tlr3Q99MB1 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC26.48■■□□□ 1.83
Tlr3Q99MB1 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC26.48■■□□□ 1.83
Tlr3Q99MB1 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC26.47■■□□□ 1.83
Tlr3Q99MB1 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC26.47■■□□□ 1.83
Tlr3Q99MB1 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC26.45■■□□□ 1.83
Tlr3Q99MB1 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
Tlr3Q99MB1 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
Tlr3Q99MB1 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC26.44■■□□□ 1.82
Tlr3Q99MB1 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC26.43■■□□□ 1.82
Tlr3Q99MB1 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
Tlr3Q99MB1 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
Tlr3Q99MB1 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
Tlr3Q99MB1 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
Tlr3Q99MB1 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC26.4■■□□□ 1.82
Tlr3Q99MB1 Gm9397-201ENSMUST00000200125 605 ntBASIC26.4■■□□□ 1.82
Tlr3Q99MB1 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
Tlr3Q99MB1 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
Tlr3Q99MB1 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC26.38■■□□□ 1.81
Tlr3Q99MB1 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC26.38■■□□□ 1.81
Tlr3Q99MB1 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC26.35■■□□□ 1.81
Tlr3Q99MB1 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
Tlr3Q99MB1 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
Tlr3Q99MB1 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
Tlr3Q99MB1 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
Tlr3Q99MB1 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
Tlr3Q99MB1 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
Tlr3Q99MB1 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
Tlr3Q99MB1 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
Tlr3Q99MB1 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
Tlr3Q99MB1 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC26.32■■□□□ 1.8
Tlr3Q99MB1 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC26.32■■□□□ 1.8
Tlr3Q99MB1 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC26.32■■□□□ 1.8
Tlr3Q99MB1 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC26.32■■□□□ 1.8
Tlr3Q99MB1 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC26.31■■□□□ 1.8
Tlr3Q99MB1 Gm43863-201ENSMUST00000203822 1192 ntBASIC26.31■■□□□ 1.8
Tlr3Q99MB1 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC26.31■■□□□ 1.8
Tlr3Q99MB1 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
Tlr3Q99MB1 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
Tlr3Q99MB1 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
Tlr3Q99MB1 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC26.29■■□□□ 1.8
Tlr3Q99MB1 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
Tlr3Q99MB1 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC26.29■■□□□ 1.8
Tlr3Q99MB1 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
Tlr3Q99MB1 Amer2-203ENSMUST00000225247 2662 ntBASIC26.28■■□□□ 1.8
Tlr3Q99MB1 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC26.28■■□□□ 1.8
Tlr3Q99MB1 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC26.28■■□□□ 1.8
Tlr3Q99MB1 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
Tlr3Q99MB1 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
Tlr3Q99MB1 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC26.27■■□□□ 1.8
Tlr3Q99MB1 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC26.27■■□□□ 1.8
Tlr3Q99MB1 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC26.26■■□□□ 1.79
Tlr3Q99MB1 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
Tlr3Q99MB1 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC26.26■■□□□ 1.79
Retrieved 100 of 76,532 protein–RNA pairs in 19.9 ms