Protein–RNA interactions for Protein: Q91XY5

Pcdhga3, Protocadherin gamma A3, mousemouse

Predictions only

Length 928 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga3Q91XY5 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Pcdhga3Q91XY5 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC21.77■■□□□ 1.08
Pcdhga3Q91XY5 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Pcdhga3Q91XY5 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.08
Pcdhga3Q91XY5 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.07
Pcdhga3Q91XY5 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Pcdhga3Q91XY5 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Pcdhga3Q91XY5 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Pcdhga3Q91XY5 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC21.75■■□□□ 1.07
Pcdhga3Q91XY5 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Pcdhga3Q91XY5 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Pcdhga3Q91XY5 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Pcdhga3Q91XY5 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Pcdhga3Q91XY5 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Pcdhga3Q91XY5 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Pcdhga3Q91XY5 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Pcdhga3Q91XY5 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
Pcdhga3Q91XY5 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Pcdhga3Q91XY5 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Pcdhga3Q91XY5 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Pcdhga3Q91XY5 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Pcdhga3Q91XY5 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Pcdhga3Q91XY5 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
Pcdhga3Q91XY5 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Pcdhga3Q91XY5 Zfp131-205ENSMUST00000223812 663 ntBASIC21.67■■□□□ 1.06
Pcdhga3Q91XY5 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Pcdhga3Q91XY5 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Pcdhga3Q91XY5 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
Pcdhga3Q91XY5 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Pcdhga3Q91XY5 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Pcdhga3Q91XY5 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC21.64■■□□□ 1.05
Pcdhga3Q91XY5 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Pcdhga3Q91XY5 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Pcdhga3Q91XY5 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Pcdhga3Q91XY5 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
Pcdhga3Q91XY5 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC21.63■■□□□ 1.05
Pcdhga3Q91XY5 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Pcdhga3Q91XY5 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Pcdhga3Q91XY5 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Pcdhga3Q91XY5 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
Pcdhga3Q91XY5 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Pcdhga3Q91XY5 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC21.61■■□□□ 1.05
Pcdhga3Q91XY5 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC21.6■■□□□ 1.05
Pcdhga3Q91XY5 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Pcdhga3Q91XY5 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Pcdhga3Q91XY5 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Pcdhga3Q91XY5 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Pcdhga3Q91XY5 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC21.59■■□□□ 1.05
Pcdhga3Q91XY5 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Pcdhga3Q91XY5 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC21.58■■□□□ 1.05
Pcdhga3Q91XY5 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Pcdhga3Q91XY5 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Pcdhga3Q91XY5 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Pcdhga3Q91XY5 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Pcdhga3Q91XY5 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC21.57■■□□□ 1.04
Pcdhga3Q91XY5 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Pcdhga3Q91XY5 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Pcdhga3Q91XY5 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC21.57■■□□□ 1.04
Pcdhga3Q91XY5 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Pcdhga3Q91XY5 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Pcdhga3Q91XY5 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
Pcdhga3Q91XY5 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Pcdhga3Q91XY5 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Pcdhga3Q91XY5 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Pcdhga3Q91XY5 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Pcdhga3Q91XY5 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Pcdhga3Q91XY5 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Pcdhga3Q91XY5 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Pcdhga3Q91XY5 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Pcdhga3Q91XY5 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC21.53■■□□□ 1.04
Pcdhga3Q91XY5 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC21.53■■□□□ 1.04
Pcdhga3Q91XY5 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
Pcdhga3Q91XY5 Tdp2-203ENSMUST00000223804 1136 ntBASIC21.53■■□□□ 1.04
Pcdhga3Q91XY5 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Pcdhga3Q91XY5 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Pcdhga3Q91XY5 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
Pcdhga3Q91XY5 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC21.5■■□□□ 1.03
Pcdhga3Q91XY5 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Pcdhga3Q91XY5 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Pcdhga3Q91XY5 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC21.49■■□□□ 1.03
Pcdhga3Q91XY5 Amer2-203ENSMUST00000225247 2662 ntBASIC21.49■■□□□ 1.03
Pcdhga3Q91XY5 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC21.48■■□□□ 1.03
Pcdhga3Q91XY5 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC21.48■■□□□ 1.03
Pcdhga3Q91XY5 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Pcdhga3Q91XY5 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Pcdhga3Q91XY5 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
Pcdhga3Q91XY5 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC21.47■■□□□ 1.03
Pcdhga3Q91XY5 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Pcdhga3Q91XY5 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Pcdhga3Q91XY5 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Pcdhga3Q91XY5 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC21.46■■□□□ 1.03
Pcdhga3Q91XY5 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC21.45■■□□□ 1.02
Pcdhga3Q91XY5 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Pcdhga3Q91XY5 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Pcdhga3Q91XY5 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC21.44■■□□□ 1.02
Pcdhga3Q91XY5 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Pcdhga3Q91XY5 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Pcdhga3Q91XY5 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
Pcdhga3Q91XY5 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC21.41■■□□□ 1.02
Pcdhga3Q91XY5 Gm9397-201ENSMUST00000200125 605 ntBASIC21.41■■□□□ 1.02
Retrieved 100 of 76,532 protein–RNA pairs in 115.3 ms