Protein–RNA interactions for Protein: Q91XX6

Pcdhgb4, Protocadherin gamma B4, mousemouse

Predictions only

Length 912 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgb4Q91XX6 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
Pcdhgb4Q91XX6 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
Pcdhgb4Q91XX6 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC26.26■■□□□ 1.79
Pcdhgb4Q91XX6 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
Pcdhgb4Q91XX6 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC26.25■■□□□ 1.79
Pcdhgb4Q91XX6 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC26.24■■□□□ 1.79
Pcdhgb4Q91XX6 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC26.23■■□□□ 1.79
Pcdhgb4Q91XX6 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
Pcdhgb4Q91XX6 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
Pcdhgb4Q91XX6 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
Pcdhgb4Q91XX6 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
Pcdhgb4Q91XX6 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC26.22■■□□□ 1.79
Pcdhgb4Q91XX6 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC26.22■■□□□ 1.79
Pcdhgb4Q91XX6 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC26.21■■□□□ 1.79
Pcdhgb4Q91XX6 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
Pcdhgb4Q91XX6 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
Pcdhgb4Q91XX6 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
Pcdhgb4Q91XX6 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC26.19■■□□□ 1.78
Pcdhgb4Q91XX6 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC26.19■■□□□ 1.78
Pcdhgb4Q91XX6 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
Pcdhgb4Q91XX6 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
Pcdhgb4Q91XX6 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
Pcdhgb4Q91XX6 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC26.18■■□□□ 1.78
Pcdhgb4Q91XX6 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
Pcdhgb4Q91XX6 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC26.17■■□□□ 1.78
Pcdhgb4Q91XX6 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
Pcdhgb4Q91XX6 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC26.14■■□□□ 1.78
Pcdhgb4Q91XX6 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC26.14■■□□□ 1.78
Pcdhgb4Q91XX6 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
Pcdhgb4Q91XX6 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
Pcdhgb4Q91XX6 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC26.13■■□□□ 1.77
Pcdhgb4Q91XX6 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
Pcdhgb4Q91XX6 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC26.12■■□□□ 1.77
Pcdhgb4Q91XX6 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
Pcdhgb4Q91XX6 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC26.1■■□□□ 1.77
Pcdhgb4Q91XX6 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
Pcdhgb4Q91XX6 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC26.1■■□□□ 1.77
Pcdhgb4Q91XX6 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC26.1■■□□□ 1.77
Pcdhgb4Q91XX6 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
Pcdhgb4Q91XX6 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC26.09■■□□□ 1.77
Pcdhgb4Q91XX6 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC26.08■■□□□ 1.77
Pcdhgb4Q91XX6 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
Pcdhgb4Q91XX6 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
Pcdhgb4Q91XX6 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC26.06■■□□□ 1.76
Pcdhgb4Q91XX6 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
Pcdhgb4Q91XX6 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
Pcdhgb4Q91XX6 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
Pcdhgb4Q91XX6 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
Pcdhgb4Q91XX6 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
Pcdhgb4Q91XX6 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC26.03■■□□□ 1.76
Pcdhgb4Q91XX6 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC26.03■■□□□ 1.76
Pcdhgb4Q91XX6 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC26.03■■□□□ 1.76
Pcdhgb4Q91XX6 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
Pcdhgb4Q91XX6 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
Pcdhgb4Q91XX6 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC26.02■■□□□ 1.76
Pcdhgb4Q91XX6 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC26.01■■□□□ 1.75
Pcdhgb4Q91XX6 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC26.01■■□□□ 1.75
Pcdhgb4Q91XX6 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC26.01■■□□□ 1.75
Pcdhgb4Q91XX6 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
Pcdhgb4Q91XX6 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
Pcdhgb4Q91XX6 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
Pcdhgb4Q91XX6 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
Pcdhgb4Q91XX6 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC25.97■■□□□ 1.75
Pcdhgb4Q91XX6 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
Pcdhgb4Q91XX6 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC25.96■■□□□ 1.75
Pcdhgb4Q91XX6 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
Pcdhgb4Q91XX6 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
Pcdhgb4Q91XX6 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
Pcdhgb4Q91XX6 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
Pcdhgb4Q91XX6 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
Pcdhgb4Q91XX6 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC25.94■■□□□ 1.74
Pcdhgb4Q91XX6 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
Pcdhgb4Q91XX6 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
Pcdhgb4Q91XX6 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC25.93■■□□□ 1.74
Pcdhgb4Q91XX6 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
Pcdhgb4Q91XX6 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC25.92■■□□□ 1.74
Pcdhgb4Q91XX6 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
Pcdhgb4Q91XX6 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
Pcdhgb4Q91XX6 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC25.91■■□□□ 1.74
Pcdhgb4Q91XX6 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
Pcdhgb4Q91XX6 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
Pcdhgb4Q91XX6 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.73
Pcdhgb4Q91XX6 Fezf2-202ENSMUST00000224023 1917 ntBASIC25.88■■□□□ 1.73
Pcdhgb4Q91XX6 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC25.88■■□□□ 1.73
Pcdhgb4Q91XX6 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
Pcdhgb4Q91XX6 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
Pcdhgb4Q91XX6 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
Pcdhgb4Q91XX6 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
Pcdhgb4Q91XX6 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
Pcdhgb4Q91XX6 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
Pcdhgb4Q91XX6 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
Pcdhgb4Q91XX6 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
Pcdhgb4Q91XX6 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC25.84■■□□□ 1.73
Pcdhgb4Q91XX6 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
Pcdhgb4Q91XX6 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC25.82■■□□□ 1.72
Pcdhgb4Q91XX6 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
Pcdhgb4Q91XX6 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
Pcdhgb4Q91XX6 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC25.79■■□□□ 1.72
Pcdhgb4Q91XX6 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC25.78■■□□□ 1.72
Pcdhgb4Q91XX6 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
Retrieved 100 of 76,532 protein–RNA pairs in 72.8 ms