Protein–RNA interactions for Protein: Q8VC56

Rnf8, E3 ubiquitin-protein ligase RNF8, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf8Q8VC56 Gm6345-201ENSMUST00000180378 1691 ntBASIC23.51■■□□□ 1.35
Rnf8Q8VC56 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Rnf8Q8VC56 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC23.5■■□□□ 1.35
Rnf8Q8VC56 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC23.5■■□□□ 1.35
Rnf8Q8VC56 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC23.49■■□□□ 1.35
Rnf8Q8VC56 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Rnf8Q8VC56 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC23.48■■□□□ 1.35
Rnf8Q8VC56 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC23.48■■□□□ 1.35
Rnf8Q8VC56 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
Rnf8Q8VC56 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
Rnf8Q8VC56 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
Rnf8Q8VC56 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
Rnf8Q8VC56 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC23.45■■□□□ 1.34
Rnf8Q8VC56 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
Rnf8Q8VC56 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC23.43■■□□□ 1.34
Rnf8Q8VC56 Tdp2-203ENSMUST00000223804 1136 ntBASIC23.43■■□□□ 1.34
Rnf8Q8VC56 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
Rnf8Q8VC56 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC23.41■■□□□ 1.34
Rnf8Q8VC56 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC23.41■■□□□ 1.34
Rnf8Q8VC56 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC23.4■■□□□ 1.34
Rnf8Q8VC56 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
Rnf8Q8VC56 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
Rnf8Q8VC56 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC23.39■■□□□ 1.34
Rnf8Q8VC56 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC23.39■■□□□ 1.33
Rnf8Q8VC56 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
Rnf8Q8VC56 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC23.38■■□□□ 1.33
Rnf8Q8VC56 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC23.38■■□□□ 1.33
Rnf8Q8VC56 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC23.38■■□□□ 1.33
Rnf8Q8VC56 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
Rnf8Q8VC56 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
Rnf8Q8VC56 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Rnf8Q8VC56 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC23.37■■□□□ 1.33
Rnf8Q8VC56 Fezf2-202ENSMUST00000224023 1917 ntBASIC23.36■■□□□ 1.33
Rnf8Q8VC56 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC23.36■■□□□ 1.33
Rnf8Q8VC56 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC23.36■■□□□ 1.33
Rnf8Q8VC56 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC23.35■■□□□ 1.33
Rnf8Q8VC56 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC23.35■■□□□ 1.33
Rnf8Q8VC56 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Rnf8Q8VC56 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Rnf8Q8VC56 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Rnf8Q8VC56 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC23.34■■□□□ 1.33
Rnf8Q8VC56 Gm30346-201ENSMUST00000218641 1699 ntBASIC23.34■■□□□ 1.33
Rnf8Q8VC56 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC23.33■■□□□ 1.33
Rnf8Q8VC56 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC23.33■■□□□ 1.33
Rnf8Q8VC56 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC23.33■■□□□ 1.33
Rnf8Q8VC56 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
Rnf8Q8VC56 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC23.33■■□□□ 1.33
Rnf8Q8VC56 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Rnf8Q8VC56 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
Rnf8Q8VC56 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Rnf8Q8VC56 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Rnf8Q8VC56 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Rnf8Q8VC56 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Rnf8Q8VC56 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC23.28■■□□□ 1.32
Rnf8Q8VC56 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC23.28■■□□□ 1.32
Rnf8Q8VC56 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Rnf8Q8VC56 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC23.27■■□□□ 1.32
Rnf8Q8VC56 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC23.27■■□□□ 1.32
Rnf8Q8VC56 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Rnf8Q8VC56 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
Rnf8Q8VC56 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
Rnf8Q8VC56 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC23.26■■□□□ 1.31
Rnf8Q8VC56 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Rnf8Q8VC56 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Rnf8Q8VC56 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Rnf8Q8VC56 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC23.25■■□□□ 1.31
Rnf8Q8VC56 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC23.25■■□□□ 1.31
Rnf8Q8VC56 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Rnf8Q8VC56 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC23.23■■□□□ 1.31
Rnf8Q8VC56 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC23.23■■□□□ 1.31
Rnf8Q8VC56 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC23.22■■□□□ 1.31
Rnf8Q8VC56 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
Rnf8Q8VC56 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Rnf8Q8VC56 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Rnf8Q8VC56 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Rnf8Q8VC56 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
Rnf8Q8VC56 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
Rnf8Q8VC56 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC23.19■■□□□ 1.3
Rnf8Q8VC56 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC23.19■■□□□ 1.3
Rnf8Q8VC56 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
Rnf8Q8VC56 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC23.19■■□□□ 1.3
Rnf8Q8VC56 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC23.18■■□□□ 1.3
Rnf8Q8VC56 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Rnf8Q8VC56 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Rnf8Q8VC56 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
Rnf8Q8VC56 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Rnf8Q8VC56 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Rnf8Q8VC56 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
Rnf8Q8VC56 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Rnf8Q8VC56 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC23.14■■□□□ 1.29
Rnf8Q8VC56 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Rnf8Q8VC56 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Rnf8Q8VC56 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Rnf8Q8VC56 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
Rnf8Q8VC56 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Rnf8Q8VC56 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC23.12■■□□□ 1.29
Rnf8Q8VC56 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Rnf8Q8VC56 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Rnf8Q8VC56 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Rnf8Q8VC56 Gm9397-201ENSMUST00000200125 605 ntBASIC23.11■■□□□ 1.29
Retrieved 100 of 76,532 protein–RNA pairs in 16 ms