Protein–RNA interactions for Protein: Q8R1S9

Slc38a4, Sodium-coupled neutral amino acid transporter 4, mousemouse

Predictions only

Length 547 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc38a4Q8R1S9 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Slc38a4Q8R1S9 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC23.35■■□□□ 1.33
Slc38a4Q8R1S9 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
Slc38a4Q8R1S9 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Slc38a4Q8R1S9 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC23.34■■□□□ 1.33
Slc38a4Q8R1S9 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
Slc38a4Q8R1S9 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
Slc38a4Q8R1S9 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
Slc38a4Q8R1S9 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC23.32■■□□□ 1.32
Slc38a4Q8R1S9 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC23.3■■□□□ 1.32
Slc38a4Q8R1S9 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
Slc38a4Q8R1S9 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Slc38a4Q8R1S9 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC23.29■■□□□ 1.32
Slc38a4Q8R1S9 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC23.28■■□□□ 1.32
Slc38a4Q8R1S9 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Slc38a4Q8R1S9 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Slc38a4Q8R1S9 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
Slc38a4Q8R1S9 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Slc38a4Q8R1S9 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC23.26■■□□□ 1.31
Slc38a4Q8R1S9 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC23.25■■□□□ 1.31
Slc38a4Q8R1S9 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC23.25■■□□□ 1.31
Slc38a4Q8R1S9 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Slc38a4Q8R1S9 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC23.24■■□□□ 1.31
Slc38a4Q8R1S9 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
Slc38a4Q8R1S9 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
Slc38a4Q8R1S9 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Slc38a4Q8R1S9 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Slc38a4Q8R1S9 Fezf2-202ENSMUST00000224023 1917 ntBASIC23.23■■□□□ 1.31
Slc38a4Q8R1S9 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC23.23■■□□□ 1.31
Slc38a4Q8R1S9 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC23.23■■□□□ 1.31
Slc38a4Q8R1S9 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
Slc38a4Q8R1S9 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
Slc38a4Q8R1S9 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC23.23■■□□□ 1.31
Slc38a4Q8R1S9 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Slc38a4Q8R1S9 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
Slc38a4Q8R1S9 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC23.21■■□□□ 1.31
Slc38a4Q8R1S9 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC23.2■■□□□ 1.3
Slc38a4Q8R1S9 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
Slc38a4Q8R1S9 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
Slc38a4Q8R1S9 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC23.19■■□□□ 1.3
Slc38a4Q8R1S9 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
Slc38a4Q8R1S9 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Slc38a4Q8R1S9 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Slc38a4Q8R1S9 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC23.17■■□□□ 1.3
Slc38a4Q8R1S9 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Slc38a4Q8R1S9 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Slc38a4Q8R1S9 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
Slc38a4Q8R1S9 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC23.15■■□□□ 1.3
Slc38a4Q8R1S9 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Slc38a4Q8R1S9 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC23.15■■□□□ 1.3
Slc38a4Q8R1S9 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC23.15■■□□□ 1.3
Slc38a4Q8R1S9 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC23.14■■□□□ 1.29
Slc38a4Q8R1S9 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC23.13■■□□□ 1.29
Slc38a4Q8R1S9 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
Slc38a4Q8R1S9 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
Slc38a4Q8R1S9 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Slc38a4Q8R1S9 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC23.13■■□□□ 1.29
Slc38a4Q8R1S9 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Slc38a4Q8R1S9 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Slc38a4Q8R1S9 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Slc38a4Q8R1S9 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC23.11■■□□□ 1.29
Slc38a4Q8R1S9 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC23.11■■□□□ 1.29
Slc38a4Q8R1S9 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC23.11■■□□□ 1.29
Slc38a4Q8R1S9 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
Slc38a4Q8R1S9 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC23.1■■□□□ 1.29
Slc38a4Q8R1S9 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Slc38a4Q8R1S9 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC23.09■■□□□ 1.29
Slc38a4Q8R1S9 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
Slc38a4Q8R1S9 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC23.08■■□□□ 1.29
Slc38a4Q8R1S9 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
Slc38a4Q8R1S9 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
Slc38a4Q8R1S9 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC23.08■■□□□ 1.28
Slc38a4Q8R1S9 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Slc38a4Q8R1S9 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
Slc38a4Q8R1S9 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Slc38a4Q8R1S9 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
Slc38a4Q8R1S9 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC23.06■■□□□ 1.28
Slc38a4Q8R1S9 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC23.05■■□□□ 1.28
Slc38a4Q8R1S9 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
Slc38a4Q8R1S9 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Slc38a4Q8R1S9 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC23.04■■□□□ 1.28
Slc38a4Q8R1S9 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Slc38a4Q8R1S9 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC23.03■■□□□ 1.28
Slc38a4Q8R1S9 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC23.03■■□□□ 1.28
Slc38a4Q8R1S9 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
Slc38a4Q8R1S9 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC23.03■■□□□ 1.28
Slc38a4Q8R1S9 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
Slc38a4Q8R1S9 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Slc38a4Q8R1S9 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC23.01■■□□□ 1.27
Slc38a4Q8R1S9 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Slc38a4Q8R1S9 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC23■■□□□ 1.27
Slc38a4Q8R1S9 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC23■■□□□ 1.27
Slc38a4Q8R1S9 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Slc38a4Q8R1S9 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC22.99■■□□□ 1.27
Slc38a4Q8R1S9 Zfp131-205ENSMUST00000223812 663 ntBASIC22.98■■□□□ 1.27
Slc38a4Q8R1S9 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
Slc38a4Q8R1S9 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC22.97■■□□□ 1.27
Slc38a4Q8R1S9 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Slc38a4Q8R1S9 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Slc38a4Q8R1S9 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC22.96■■□□□ 1.27
Retrieved 100 of 76,532 protein–RNA pairs in 16.2 ms