Protein–RNA interactions for Protein: Q8R1C0

Kcnc4, Potassium voltage-gated channel subfamily C member 4, mousemouse

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Kcnc4Q8R1C0 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC28.8■■■□□ 2.2
Kcnc4Q8R1C0 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC28.8■■■□□ 2.2
Kcnc4Q8R1C0 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC28.79■■■□□ 2.2
Kcnc4Q8R1C0 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC28.79■■■□□ 2.2
Kcnc4Q8R1C0 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC28.78■■■□□ 2.2
Kcnc4Q8R1C0 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC28.77■■■□□ 2.2
Kcnc4Q8R1C0 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC28.77■■■□□ 2.2
Kcnc4Q8R1C0 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC28.76■■■□□ 2.2
Kcnc4Q8R1C0 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC28.76■■■□□ 2.2
Kcnc4Q8R1C0 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC28.76■■■□□ 2.19
Kcnc4Q8R1C0 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC28.75■■■□□ 2.19
Kcnc4Q8R1C0 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC28.72■■■□□ 2.19
Kcnc4Q8R1C0 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC28.71■■■□□ 2.19
Kcnc4Q8R1C0 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC28.71■■■□□ 2.19
Kcnc4Q8R1C0 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC28.7■■■□□ 2.19
Kcnc4Q8R1C0 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC28.7■■■□□ 2.18
Kcnc4Q8R1C0 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC28.7■■■□□ 2.18
Kcnc4Q8R1C0 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC28.69■■■□□ 2.18
Kcnc4Q8R1C0 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC28.67■■■□□ 2.18
Kcnc4Q8R1C0 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC28.67■■■□□ 2.18
Kcnc4Q8R1C0 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC28.66■■■□□ 2.18
Kcnc4Q8R1C0 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC28.64■■■□□ 2.18
Kcnc4Q8R1C0 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC28.63■■■□□ 2.17
Kcnc4Q8R1C0 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC28.63■■■□□ 2.17
Kcnc4Q8R1C0 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC28.62■■■□□ 2.17
Kcnc4Q8R1C0 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC28.62■■■□□ 2.17
Kcnc4Q8R1C0 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC28.61■■■□□ 2.17
Kcnc4Q8R1C0 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC28.61■■■□□ 2.17
Kcnc4Q8R1C0 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC28.6■■■□□ 2.17
Kcnc4Q8R1C0 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC28.6■■■□□ 2.17
Kcnc4Q8R1C0 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC28.6■■■□□ 2.17
Kcnc4Q8R1C0 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC28.59■■■□□ 2.17
Kcnc4Q8R1C0 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC28.58■■■□□ 2.17
Kcnc4Q8R1C0 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC28.58■■■□□ 2.17
Kcnc4Q8R1C0 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC28.57■■■□□ 2.16
Kcnc4Q8R1C0 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC28.56■■■□□ 2.16
Kcnc4Q8R1C0 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC28.55■■■□□ 2.16
Kcnc4Q8R1C0 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC28.55■■■□□ 2.16
Kcnc4Q8R1C0 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC28.55■■■□□ 2.16
Kcnc4Q8R1C0 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC28.54■■■□□ 2.16
Kcnc4Q8R1C0 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC28.54■■■□□ 2.16
Kcnc4Q8R1C0 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC28.52■■■□□ 2.16
Kcnc4Q8R1C0 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC28.52■■■□□ 2.16
Kcnc4Q8R1C0 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC28.52■■■□□ 2.16
Kcnc4Q8R1C0 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC28.51■■■□□ 2.15
Kcnc4Q8R1C0 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC28.51■■■□□ 2.15
Kcnc4Q8R1C0 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC28.51■■■□□ 2.15
Kcnc4Q8R1C0 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC28.51■■■□□ 2.15
Kcnc4Q8R1C0 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC28.5■■■□□ 2.15
Kcnc4Q8R1C0 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC28.49■■■□□ 2.15
Kcnc4Q8R1C0 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC28.49■■■□□ 2.15
Kcnc4Q8R1C0 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC28.48■■■□□ 2.15
Kcnc4Q8R1C0 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC28.48■■■□□ 2.15
Kcnc4Q8R1C0 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC28.47■■■□□ 2.15
Kcnc4Q8R1C0 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC28.47■■■□□ 2.15
Kcnc4Q8R1C0 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC28.44■■■□□ 2.14
Kcnc4Q8R1C0 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC28.44■■■□□ 2.14
Kcnc4Q8R1C0 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
Kcnc4Q8R1C0 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
Kcnc4Q8R1C0 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC28.43■■■□□ 2.14
Kcnc4Q8R1C0 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC28.43■■■□□ 2.14
Kcnc4Q8R1C0 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC28.42■■■□□ 2.14
Kcnc4Q8R1C0 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC28.42■■■□□ 2.14
Kcnc4Q8R1C0 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
Kcnc4Q8R1C0 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC28.41■■■□□ 2.14
Kcnc4Q8R1C0 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC28.41■■■□□ 2.14
Kcnc4Q8R1C0 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
Kcnc4Q8R1C0 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
Kcnc4Q8R1C0 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC28.39■■■□□ 2.14
Kcnc4Q8R1C0 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC28.39■■■□□ 2.13
Kcnc4Q8R1C0 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC28.38■■■□□ 2.13
Kcnc4Q8R1C0 Gm6311-201ENSMUST00000073790 878 ntBASIC28.38■■■□□ 2.13
Kcnc4Q8R1C0 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC28.36■■■□□ 2.13
Kcnc4Q8R1C0 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC28.36■■■□□ 2.13
Kcnc4Q8R1C0 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC28.36■■■□□ 2.13
Kcnc4Q8R1C0 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
Kcnc4Q8R1C0 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC28.34■■■□□ 2.13
Kcnc4Q8R1C0 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
Kcnc4Q8R1C0 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC28.33■■■□□ 2.13
Kcnc4Q8R1C0 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC28.32■■■□□ 2.12
Kcnc4Q8R1C0 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC28.32■■■□□ 2.12
Kcnc4Q8R1C0 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC28.3■■■□□ 2.12
Kcnc4Q8R1C0 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC28.3■■■□□ 2.12
Kcnc4Q8R1C0 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC28.29■■■□□ 2.12
Kcnc4Q8R1C0 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC28.29■■■□□ 2.12
Kcnc4Q8R1C0 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC28.29■■■□□ 2.12
Kcnc4Q8R1C0 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC28.27■■■□□ 2.12
Kcnc4Q8R1C0 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC28.27■■■□□ 2.12
Kcnc4Q8R1C0 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC28.26■■■□□ 2.11
Kcnc4Q8R1C0 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC28.25■■■□□ 2.11
Kcnc4Q8R1C0 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
Kcnc4Q8R1C0 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC28.24■■■□□ 2.11
Kcnc4Q8R1C0 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC28.23■■■□□ 2.11
Kcnc4Q8R1C0 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC28.23■■■□□ 2.11
Kcnc4Q8R1C0 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC28.22■■■□□ 2.11
Kcnc4Q8R1C0 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC28.21■■■□□ 2.11
Kcnc4Q8R1C0 Gm22567-201ENSMUST00000175542 342 ntBASIC28.21■■■□□ 2.11
Kcnc4Q8R1C0 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC28.21■■■□□ 2.11
Kcnc4Q8R1C0 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.11
Kcnc4Q8R1C0 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.1
Retrieved 100 of 76,532 protein–RNA pairs in 15.7 ms