Protein–RNA interactions for Protein: Q8K2V1

Ppp4r1, Serine/threonine-protein phosphatase 4 regulatory subunit 1, mousemouse

Predictions only

Length 951 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ppp4r1Q8K2V1 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC25.16■■□□□ 1.62
Ppp4r1Q8K2V1 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
Ppp4r1Q8K2V1 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC25.14■■□□□ 1.62
Ppp4r1Q8K2V1 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC25.14■■□□□ 1.61
Ppp4r1Q8K2V1 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC25.13■■□□□ 1.61
Ppp4r1Q8K2V1 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
Ppp4r1Q8K2V1 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
Ppp4r1Q8K2V1 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
Ppp4r1Q8K2V1 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
Ppp4r1Q8K2V1 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
Ppp4r1Q8K2V1 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
Ppp4r1Q8K2V1 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC25.1■■□□□ 1.61
Ppp4r1Q8K2V1 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
Ppp4r1Q8K2V1 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC25.1■■□□□ 1.61
Ppp4r1Q8K2V1 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC25.1■■□□□ 1.61
Ppp4r1Q8K2V1 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
Ppp4r1Q8K2V1 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC25.08■■□□□ 1.6
Ppp4r1Q8K2V1 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC25.07■■□□□ 1.6
Ppp4r1Q8K2V1 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
Ppp4r1Q8K2V1 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
Ppp4r1Q8K2V1 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC25.07■■□□□ 1.6
Ppp4r1Q8K2V1 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC25.06■■□□□ 1.6
Ppp4r1Q8K2V1 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
Ppp4r1Q8K2V1 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
Ppp4r1Q8K2V1 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
Ppp4r1Q8K2V1 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
Ppp4r1Q8K2V1 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC25.04■■□□□ 1.6
Ppp4r1Q8K2V1 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC25.03■■□□□ 1.6
Ppp4r1Q8K2V1 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
Ppp4r1Q8K2V1 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
Ppp4r1Q8K2V1 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
Ppp4r1Q8K2V1 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC25.02■■□□□ 1.6
Ppp4r1Q8K2V1 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC25.02■■□□□ 1.6
Ppp4r1Q8K2V1 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
Ppp4r1Q8K2V1 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
Ppp4r1Q8K2V1 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC25■■□□□ 1.59
Ppp4r1Q8K2V1 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC25■■□□□ 1.59
Ppp4r1Q8K2V1 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
Ppp4r1Q8K2V1 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC24.99■■□□□ 1.59
Ppp4r1Q8K2V1 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC24.99■■□□□ 1.59
Ppp4r1Q8K2V1 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
Ppp4r1Q8K2V1 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
Ppp4r1Q8K2V1 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC24.98■■□□□ 1.59
Ppp4r1Q8K2V1 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
Ppp4r1Q8K2V1 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
Ppp4r1Q8K2V1 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
Ppp4r1Q8K2V1 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
Ppp4r1Q8K2V1 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
Ppp4r1Q8K2V1 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
Ppp4r1Q8K2V1 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
Ppp4r1Q8K2V1 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
Ppp4r1Q8K2V1 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
Ppp4r1Q8K2V1 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC24.93■■□□□ 1.58
Ppp4r1Q8K2V1 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC24.92■■□□□ 1.58
Ppp4r1Q8K2V1 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
Ppp4r1Q8K2V1 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
Ppp4r1Q8K2V1 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
Ppp4r1Q8K2V1 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC24.91■■□□□ 1.58
Ppp4r1Q8K2V1 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC24.91■■□□□ 1.58
Ppp4r1Q8K2V1 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC24.91■■□□□ 1.58
Ppp4r1Q8K2V1 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
Ppp4r1Q8K2V1 Amer2-203ENSMUST00000225247 2662 ntBASIC24.89■■□□□ 1.58
Ppp4r1Q8K2V1 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
Ppp4r1Q8K2V1 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
Ppp4r1Q8K2V1 Zfp131-205ENSMUST00000223812 663 ntBASIC24.87■■□□□ 1.57
Ppp4r1Q8K2V1 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC24.87■■□□□ 1.57
Ppp4r1Q8K2V1 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
Ppp4r1Q8K2V1 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC24.86■■□□□ 1.57
Ppp4r1Q8K2V1 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
Ppp4r1Q8K2V1 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
Ppp4r1Q8K2V1 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
Ppp4r1Q8K2V1 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.56
Ppp4r1Q8K2V1 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
Ppp4r1Q8K2V1 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC24.82■■□□□ 1.56
Ppp4r1Q8K2V1 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
Ppp4r1Q8K2V1 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
Ppp4r1Q8K2V1 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC24.8■■□□□ 1.56
Ppp4r1Q8K2V1 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
Ppp4r1Q8K2V1 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC24.79■■□□□ 1.56
Ppp4r1Q8K2V1 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
Ppp4r1Q8K2V1 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
Ppp4r1Q8K2V1 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC24.78■■□□□ 1.56
Ppp4r1Q8K2V1 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC24.78■■□□□ 1.56
Ppp4r1Q8K2V1 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
Ppp4r1Q8K2V1 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC24.75■■□□□ 1.55
Ppp4r1Q8K2V1 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC24.75■■□□□ 1.55
Ppp4r1Q8K2V1 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
Ppp4r1Q8K2V1 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
Ppp4r1Q8K2V1 Tdp2-203ENSMUST00000223804 1136 ntBASIC24.75■■□□□ 1.55
Ppp4r1Q8K2V1 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
Ppp4r1Q8K2V1 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC24.73■■□□□ 1.55
Ppp4r1Q8K2V1 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC24.73■■□□□ 1.55
Ppp4r1Q8K2V1 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC24.73■■□□□ 1.55
Ppp4r1Q8K2V1 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC24.72■■□□□ 1.55
Ppp4r1Q8K2V1 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
Ppp4r1Q8K2V1 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC24.72■■□□□ 1.55
Ppp4r1Q8K2V1 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
Ppp4r1Q8K2V1 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
Ppp4r1Q8K2V1 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
Ppp4r1Q8K2V1 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC24.71■■□□□ 1.55
Retrieved 100 of 76,532 protein–RNA pairs in 12.5 ms