Protein–RNA interactions for Protein: Q8K2I2

Cchcr1, Coiled-coil alpha-helical rod protein 1, mousemouse

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cchcr1Q8K2I2 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC29.33■■■□□ 2.29
Cchcr1Q8K2I2 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC29.33■■■□□ 2.29
Cchcr1Q8K2I2 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC29.32■■■□□ 2.28
Cchcr1Q8K2I2 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC29.32■■■□□ 2.28
Cchcr1Q8K2I2 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC29.32■■■□□ 2.28
Cchcr1Q8K2I2 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC29.31■■■□□ 2.28
Cchcr1Q8K2I2 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC29.27■■■□□ 2.28
Cchcr1Q8K2I2 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC29.27■■■□□ 2.28
Cchcr1Q8K2I2 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC29.27■■■□□ 2.28
Cchcr1Q8K2I2 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC29.27■■■□□ 2.28
Cchcr1Q8K2I2 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC29.26■■■□□ 2.27
Cchcr1Q8K2I2 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC29.26■■■□□ 2.27
Cchcr1Q8K2I2 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC29.26■■■□□ 2.27
Cchcr1Q8K2I2 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC29.25■■■□□ 2.27
Cchcr1Q8K2I2 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC29.25■■■□□ 2.27
Cchcr1Q8K2I2 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC29.24■■■□□ 2.27
Cchcr1Q8K2I2 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC29.23■■■□□ 2.27
Cchcr1Q8K2I2 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC29.22■■■□□ 2.27
Cchcr1Q8K2I2 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC29.22■■■□□ 2.27
Cchcr1Q8K2I2 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC29.22■■■□□ 2.27
Cchcr1Q8K2I2 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC29.21■■■□□ 2.27
Cchcr1Q8K2I2 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC29.21■■■□□ 2.27
Cchcr1Q8K2I2 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC29.2■■■□□ 2.27
Cchcr1Q8K2I2 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC29.19■■■□□ 2.26
Cchcr1Q8K2I2 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC29.19■■■□□ 2.26
Cchcr1Q8K2I2 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC29.17■■■□□ 2.26
Cchcr1Q8K2I2 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC29.17■■■□□ 2.26
Cchcr1Q8K2I2 Fezf2-202ENSMUST00000224023 1917 ntBASIC29.16■■■□□ 2.26
Cchcr1Q8K2I2 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC29.16■■■□□ 2.26
Cchcr1Q8K2I2 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC29.15■■■□□ 2.26
Cchcr1Q8K2I2 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC29.15■■■□□ 2.26
Cchcr1Q8K2I2 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC29.15■■■□□ 2.26
Cchcr1Q8K2I2 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC29.15■■■□□ 2.26
Cchcr1Q8K2I2 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC29.15■■■□□ 2.26
Cchcr1Q8K2I2 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC29.14■■■□□ 2.25
Cchcr1Q8K2I2 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC29.13■■■□□ 2.25
Cchcr1Q8K2I2 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC29.13■■■□□ 2.25
Cchcr1Q8K2I2 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC29.12■■■□□ 2.25
Cchcr1Q8K2I2 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC29.12■■■□□ 2.25
Cchcr1Q8K2I2 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC29.11■■■□□ 2.25
Cchcr1Q8K2I2 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC29.11■■■□□ 2.25
Cchcr1Q8K2I2 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC29.11■■■□□ 2.25
Cchcr1Q8K2I2 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC29.1■■■□□ 2.25
Cchcr1Q8K2I2 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC29.1■■■□□ 2.25
Cchcr1Q8K2I2 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC29.09■■■□□ 2.25
Cchcr1Q8K2I2 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC29.09■■■□□ 2.25
Cchcr1Q8K2I2 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC29.08■■■□□ 2.25
Cchcr1Q8K2I2 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC29.07■■■□□ 2.24
Cchcr1Q8K2I2 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC29.07■■■□□ 2.24
Cchcr1Q8K2I2 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC29.06■■■□□ 2.24
Cchcr1Q8K2I2 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC29.06■■■□□ 2.24
Cchcr1Q8K2I2 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC29.05■■■□□ 2.24
Cchcr1Q8K2I2 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC29.05■■■□□ 2.24
Cchcr1Q8K2I2 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC29.05■■■□□ 2.24
Cchcr1Q8K2I2 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC29.04■■■□□ 2.24
Cchcr1Q8K2I2 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC29.03■■■□□ 2.24
Cchcr1Q8K2I2 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC29.03■■■□□ 2.24
Cchcr1Q8K2I2 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC29.03■■■□□ 2.24
Cchcr1Q8K2I2 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC29.03■■■□□ 2.24
Cchcr1Q8K2I2 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC29.03■■■□□ 2.24
Cchcr1Q8K2I2 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC29.01■■■□□ 2.23
Cchcr1Q8K2I2 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC28.99■■■□□ 2.23
Cchcr1Q8K2I2 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC28.99■■■□□ 2.23
Cchcr1Q8K2I2 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC28.99■■■□□ 2.23
Cchcr1Q8K2I2 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC28.98■■■□□ 2.23
Cchcr1Q8K2I2 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC28.98■■■□□ 2.23
Cchcr1Q8K2I2 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC28.97■■■□□ 2.23
Cchcr1Q8K2I2 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC28.96■■■□□ 2.23
Cchcr1Q8K2I2 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC28.96■■■□□ 2.23
Cchcr1Q8K2I2 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC28.96■■■□□ 2.23
Cchcr1Q8K2I2 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC28.96■■■□□ 2.23
Cchcr1Q8K2I2 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC28.95■■■□□ 2.22
Cchcr1Q8K2I2 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC28.95■■■□□ 2.22
Cchcr1Q8K2I2 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC28.93■■■□□ 2.22
Cchcr1Q8K2I2 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC28.93■■■□□ 2.22
Cchcr1Q8K2I2 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC28.93■■■□□ 2.22
Cchcr1Q8K2I2 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC28.92■■■□□ 2.22
Cchcr1Q8K2I2 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC28.92■■■□□ 2.22
Cchcr1Q8K2I2 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC28.91■■■□□ 2.22
Cchcr1Q8K2I2 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC28.91■■■□□ 2.22
Cchcr1Q8K2I2 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC28.91■■■□□ 2.22
Cchcr1Q8K2I2 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC28.91■■■□□ 2.22
Cchcr1Q8K2I2 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC28.9■■■□□ 2.22
Cchcr1Q8K2I2 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC28.9■■■□□ 2.22
Cchcr1Q8K2I2 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC28.89■■■□□ 2.22
Cchcr1Q8K2I2 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC28.89■■■□□ 2.22
Cchcr1Q8K2I2 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC28.87■■■□□ 2.21
Cchcr1Q8K2I2 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC28.86■■■□□ 2.21
Cchcr1Q8K2I2 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC28.86■■■□□ 2.21
Cchcr1Q8K2I2 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC28.86■■■□□ 2.21
Cchcr1Q8K2I2 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC28.85■■■□□ 2.21
Cchcr1Q8K2I2 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC28.85■■■□□ 2.21
Cchcr1Q8K2I2 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC28.84■■■□□ 2.21
Cchcr1Q8K2I2 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC28.84■■■□□ 2.21
Cchcr1Q8K2I2 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC28.83■■■□□ 2.21
Cchcr1Q8K2I2 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC28.82■■■□□ 2.2
Cchcr1Q8K2I2 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC28.82■■■□□ 2.2
Cchcr1Q8K2I2 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC28.82■■■□□ 2.2
Cchcr1Q8K2I2 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC28.81■■■□□ 2.2
Cchcr1Q8K2I2 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC28.8■■■□□ 2.2
Retrieved 100 of 76,532 protein–RNA pairs in 11.4 ms