Protein–RNA interactions for Protein: Q8CG46

Smc5, Structural maintenance of chromosomes protein 5, mousemouse

Known RBP Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc5Q8CG46 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
Smc5Q8CG46 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC31.07■■■□□ 2.57
Smc5Q8CG46 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC31.06■■■□□ 2.56
Smc5Q8CG46 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC31.06■■■□□ 2.56
Smc5Q8CG46 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC31.03■■■□□ 2.56
Smc5Q8CG46 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC31.02■■■□□ 2.56
Smc5Q8CG46 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC30.99■■■□□ 2.55
Smc5Q8CG46 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC30.99■■■□□ 2.55
Smc5Q8CG46 Gm8109-201ENSMUST00000194076 746 ntBASIC30.98■■■□□ 2.55
Smc5Q8CG46 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC30.97■■■□□ 2.55
Smc5Q8CG46 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC30.97■■■□□ 2.55
Smc5Q8CG46 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC30.96■■■□□ 2.55
Smc5Q8CG46 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC30.96■■■□□ 2.55
Smc5Q8CG46 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC30.96■■■□□ 2.55
Smc5Q8CG46 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC30.95■■■□□ 2.55
Smc5Q8CG46 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC30.93■■■□□ 2.54
Smc5Q8CG46 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC30.93■■■□□ 2.54
Smc5Q8CG46 Gm26115-201ENSMUST00000175605 87 ntBASIC30.93■■■□□ 2.54
Smc5Q8CG46 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC30.93■■■□□ 2.54
Smc5Q8CG46 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC30.92■■■□□ 2.54
Smc5Q8CG46 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC30.91■■■□□ 2.54
Smc5Q8CG46 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC30.9■■■□□ 2.54
Smc5Q8CG46 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC30.9■■■□□ 2.54
Smc5Q8CG46 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC30.88■■■□□ 2.53
Smc5Q8CG46 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC30.87■■■□□ 2.53
Smc5Q8CG46 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC30.87■■■□□ 2.53
Smc5Q8CG46 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC30.87■■■□□ 2.53
Smc5Q8CG46 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC30.85■■■□□ 2.53
Smc5Q8CG46 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC30.84■■■□□ 2.53
Smc5Q8CG46 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC30.83■■■□□ 2.53
Smc5Q8CG46 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC30.83■■■□□ 2.53
Smc5Q8CG46 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC30.81■■■□□ 2.52
Smc5Q8CG46 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC30.81■■■□□ 2.52
Smc5Q8CG46 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC30.81■■■□□ 2.52
Smc5Q8CG46 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC30.81■■■□□ 2.52
Smc5Q8CG46 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC30.81■■■□□ 2.52
Smc5Q8CG46 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC30.79■■■□□ 2.52
Smc5Q8CG46 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC30.79■■■□□ 2.52
Smc5Q8CG46 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC30.78■■■□□ 2.52
Smc5Q8CG46 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC30.78■■■□□ 2.52
Smc5Q8CG46 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC30.78■■■□□ 2.52
Smc5Q8CG46 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC30.77■■■□□ 2.52
Smc5Q8CG46 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC30.77■■■□□ 2.52
Smc5Q8CG46 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC30.77■■■□□ 2.52
Smc5Q8CG46 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC30.76■■■□□ 2.52
Smc5Q8CG46 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC30.76■■■□□ 2.51
Smc5Q8CG46 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC30.76■■■□□ 2.51
Smc5Q8CG46 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC30.75■■■□□ 2.51
Smc5Q8CG46 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC30.74■■■□□ 2.51
Smc5Q8CG46 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC30.74■■■□□ 2.51
Smc5Q8CG46 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC30.72■■■□□ 2.51
Smc5Q8CG46 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
Smc5Q8CG46 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC30.7■■■□□ 2.51
Smc5Q8CG46 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.5
Smc5Q8CG46 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
Smc5Q8CG46 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
Smc5Q8CG46 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
Smc5Q8CG46 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC30.66■■■□□ 2.5
Smc5Q8CG46 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC30.66■■■□□ 2.5
Smc5Q8CG46 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC30.66■■■□□ 2.5
Smc5Q8CG46 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC30.65■■■□□ 2.5
Smc5Q8CG46 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC30.65■■■□□ 2.5
Smc5Q8CG46 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
Smc5Q8CG46 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC30.64■■■□□ 2.5
Smc5Q8CG46 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC30.63■■■□□ 2.49
Smc5Q8CG46 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
Smc5Q8CG46 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC30.61■■■□□ 2.49
Smc5Q8CG46 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC30.6■■■□□ 2.49
Smc5Q8CG46 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC30.59■■■□□ 2.49
Smc5Q8CG46 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
Smc5Q8CG46 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC30.59■■■□□ 2.49
Smc5Q8CG46 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC30.59■■■□□ 2.49
Smc5Q8CG46 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC30.59■■■□□ 2.49
Smc5Q8CG46 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC30.58■■■□□ 2.49
Smc5Q8CG46 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC30.58■■■□□ 2.49
Smc5Q8CG46 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC30.57■■■□□ 2.48
Smc5Q8CG46 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.48
Smc5Q8CG46 AC153890.1-201ENSMUST00000220021 2469 ntBASIC30.56■■■□□ 2.48
Smc5Q8CG46 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
Smc5Q8CG46 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC30.55■■■□□ 2.48
Smc5Q8CG46 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
Smc5Q8CG46 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC30.54■■■□□ 2.48
Smc5Q8CG46 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC30.54■■■□□ 2.48
Smc5Q8CG46 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC30.54■■■□□ 2.48
Smc5Q8CG46 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC30.53■■■□□ 2.48
Smc5Q8CG46 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC30.53■■■□□ 2.48
Smc5Q8CG46 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC30.53■■■□□ 2.48
Smc5Q8CG46 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC30.52■■■□□ 2.48
Smc5Q8CG46 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC30.52■■■□□ 2.48
Smc5Q8CG46 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC30.52■■■□□ 2.48
Smc5Q8CG46 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC30.51■■■□□ 2.48
Smc5Q8CG46 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC30.51■■■□□ 2.47
Smc5Q8CG46 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC30.5■■■□□ 2.47
Smc5Q8CG46 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC30.49■■■□□ 2.47
Smc5Q8CG46 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC30.49■■■□□ 2.47
Smc5Q8CG46 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC30.48■■■□□ 2.47
Smc5Q8CG46 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC30.47■■■□□ 2.47
Smc5Q8CG46 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
Smc5Q8CG46 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC30.45■■■□□ 2.47
Smc5Q8CG46 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC30.45■■■□□ 2.47
Retrieved 100 of 76,532 protein–RNA pairs in 75.2 ms