Protein–RNA interactions for Protein: Q8C8B0

Alx1, ALX homeobox protein 1, mousemouse

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx1Q8C8B0 Gm24970-201ENSMUST00000175582 82 ntBASIC29.63■■■□□ 2.33
Alx1Q8C8B0 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC29.62■■■□□ 2.33
Alx1Q8C8B0 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC29.62■■■□□ 2.33
Alx1Q8C8B0 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC29.62■■■□□ 2.33
Alx1Q8C8B0 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC29.61■■■□□ 2.33
Alx1Q8C8B0 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC29.6■■■□□ 2.33
Alx1Q8C8B0 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC29.58■■■□□ 2.33
Alx1Q8C8B0 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC29.58■■■□□ 2.33
Alx1Q8C8B0 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC29.58■■■□□ 2.33
Alx1Q8C8B0 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC29.57■■■□□ 2.32
Alx1Q8C8B0 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC29.57■■■□□ 2.32
Alx1Q8C8B0 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC29.56■■■□□ 2.32
Alx1Q8C8B0 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC29.56■■■□□ 2.32
Alx1Q8C8B0 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC29.55■■■□□ 2.32
Alx1Q8C8B0 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC29.55■■■□□ 2.32
Alx1Q8C8B0 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC29.54■■■□□ 2.32
Alx1Q8C8B0 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC29.53■■■□□ 2.32
Alx1Q8C8B0 Gm43863-201ENSMUST00000203822 1192 ntBASIC29.53■■■□□ 2.32
Alx1Q8C8B0 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC29.53■■■□□ 2.32
Alx1Q8C8B0 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC29.53■■■□□ 2.32
Alx1Q8C8B0 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC29.51■■■□□ 2.31
Alx1Q8C8B0 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC29.51■■■□□ 2.31
Alx1Q8C8B0 Zxda-201ENSMUST00000117281 2621 ntBASIC29.49■■■□□ 2.31
Alx1Q8C8B0 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC29.49■■■□□ 2.31
Alx1Q8C8B0 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC29.47■■■□□ 2.31
Alx1Q8C8B0 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC29.47■■■□□ 2.31
Alx1Q8C8B0 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC29.47■■■□□ 2.31
Alx1Q8C8B0 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC29.46■■■□□ 2.31
Alx1Q8C8B0 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC29.46■■■□□ 2.31
Alx1Q8C8B0 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC29.46■■■□□ 2.31
Alx1Q8C8B0 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC29.45■■■□□ 2.31
Alx1Q8C8B0 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC29.45■■■□□ 2.31
Alx1Q8C8B0 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC29.45■■■□□ 2.3
Alx1Q8C8B0 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC29.44■■■□□ 2.3
Alx1Q8C8B0 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC29.44■■■□□ 2.3
Alx1Q8C8B0 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC29.44■■■□□ 2.3
Alx1Q8C8B0 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC29.42■■■□□ 2.3
Alx1Q8C8B0 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC29.41■■■□□ 2.3
Alx1Q8C8B0 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC29.4■■■□□ 2.3
Alx1Q8C8B0 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC29.4■■■□□ 2.3
Alx1Q8C8B0 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC29.39■■■□□ 2.3
Alx1Q8C8B0 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC29.39■■■□□ 2.3
Alx1Q8C8B0 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC29.38■■■□□ 2.29
Alx1Q8C8B0 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC29.38■■■□□ 2.29
Alx1Q8C8B0 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC29.37■■■□□ 2.29
Alx1Q8C8B0 AC157572.2-201ENSMUST00000226970 908 ntBASIC29.37■■■□□ 2.29
Alx1Q8C8B0 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC29.37■■■□□ 2.29
Alx1Q8C8B0 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC29.36■■■□□ 2.29
Alx1Q8C8B0 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC29.35■■■□□ 2.29
Alx1Q8C8B0 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC29.34■■■□□ 2.29
Alx1Q8C8B0 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC29.33■■■□□ 2.29
Alx1Q8C8B0 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC29.33■■■□□ 2.29
Alx1Q8C8B0 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC29.32■■■□□ 2.28
Alx1Q8C8B0 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC29.32■■■□□ 2.28
Alx1Q8C8B0 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC29.31■■■□□ 2.28
Alx1Q8C8B0 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC29.31■■■□□ 2.28
Alx1Q8C8B0 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC29.3■■■□□ 2.28
Alx1Q8C8B0 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC29.29■■■□□ 2.28
Alx1Q8C8B0 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC29.28■■■□□ 2.28
Alx1Q8C8B0 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC29.28■■■□□ 2.28
Alx1Q8C8B0 Gm43445-201ENSMUST00000198564 2091 ntBASIC29.27■■■□□ 2.28
Alx1Q8C8B0 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC29.26■■■□□ 2.27
Alx1Q8C8B0 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC29.26■■■□□ 2.27
Alx1Q8C8B0 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC29.26■■■□□ 2.27
Alx1Q8C8B0 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC29.25■■■□□ 2.27
Alx1Q8C8B0 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC29.24■■■□□ 2.27
Alx1Q8C8B0 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC29.23■■■□□ 2.27
Alx1Q8C8B0 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC29.23■■■□□ 2.27
Alx1Q8C8B0 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC29.22■■■□□ 2.27
Alx1Q8C8B0 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC29.22■■■□□ 2.27
Alx1Q8C8B0 Gm6206-201ENSMUST00000133472 2199 ntBASIC29.2■■■□□ 2.27
Alx1Q8C8B0 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC29.2■■■□□ 2.26
Alx1Q8C8B0 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC29.19■■■□□ 2.26
Alx1Q8C8B0 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC29.18■■■□□ 2.26
Alx1Q8C8B0 Gm9905-201ENSMUST00000065740 1845 ntBASIC29.17■■■□□ 2.26
Alx1Q8C8B0 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC29.17■■■□□ 2.26
Alx1Q8C8B0 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC29.17■■■□□ 2.26
Alx1Q8C8B0 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC29.16■■■□□ 2.26
Alx1Q8C8B0 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC29.15■■■□□ 2.26
Alx1Q8C8B0 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC29.14■■■□□ 2.26
Alx1Q8C8B0 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC29.14■■■□□ 2.26
Alx1Q8C8B0 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC29.14■■■□□ 2.26
Alx1Q8C8B0 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC29.14■■■□□ 2.25
Alx1Q8C8B0 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC29.14■■■□□ 2.25
Alx1Q8C8B0 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC29.13■■■□□ 2.25
Alx1Q8C8B0 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC29.13■■■□□ 2.25
Alx1Q8C8B0 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC29.13■■■□□ 2.25
Alx1Q8C8B0 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC29.13■■■□□ 2.25
Alx1Q8C8B0 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC29.12■■■□□ 2.25
Alx1Q8C8B0 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC29.12■■■□□ 2.25
Alx1Q8C8B0 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC29.12■■■□□ 2.25
Alx1Q8C8B0 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC29.11■■■□□ 2.25
Alx1Q8C8B0 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC29.1■■■□□ 2.25
Alx1Q8C8B0 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC29.09■■■□□ 2.25
Alx1Q8C8B0 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC29.09■■■□□ 2.25
Alx1Q8C8B0 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC29.09■■■□□ 2.25
Alx1Q8C8B0 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC29.09■■■□□ 2.25
Alx1Q8C8B0 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC29.08■■■□□ 2.25
Alx1Q8C8B0 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC29.06■■■□□ 2.24
Alx1Q8C8B0 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC29.06■■■□□ 2.24
Retrieved 100 of 76,532 protein–RNA pairs in 9.1 ms