Protein–RNA interactions for Protein: Q8C4D8

Gm11541, Predicted gene 11541, mousemouse

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm11541Q8C4D8 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC22.14■■□□□ 1.14
Gm11541Q8C4D8 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC22.13■■□□□ 1.13
Gm11541Q8C4D8 Gm30346-201ENSMUST00000218641 1699 ntBASIC22.12■■□□□ 1.13
Gm11541Q8C4D8 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
Gm11541Q8C4D8 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC22.11■■□□□ 1.13
Gm11541Q8C4D8 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Gm11541Q8C4D8 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
Gm11541Q8C4D8 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC22.11■■□□□ 1.13
Gm11541Q8C4D8 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
Gm11541Q8C4D8 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Gm11541Q8C4D8 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC22.1■■□□□ 1.13
Gm11541Q8C4D8 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Gm11541Q8C4D8 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Gm11541Q8C4D8 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC22.08■■□□□ 1.13
Gm11541Q8C4D8 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC22.07■■□□□ 1.12
Gm11541Q8C4D8 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC22.07■■□□□ 1.12
Gm11541Q8C4D8 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC22.07■■□□□ 1.12
Gm11541Q8C4D8 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC22.07■■□□□ 1.12
Gm11541Q8C4D8 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC22.06■■□□□ 1.12
Gm11541Q8C4D8 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC22.06■■□□□ 1.12
Gm11541Q8C4D8 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
Gm11541Q8C4D8 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Gm11541Q8C4D8 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Gm11541Q8C4D8 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Gm11541Q8C4D8 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Gm11541Q8C4D8 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
Gm11541Q8C4D8 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
Gm11541Q8C4D8 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Gm11541Q8C4D8 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
Gm11541Q8C4D8 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Gm11541Q8C4D8 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC22.01■■□□□ 1.11
Gm11541Q8C4D8 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Gm11541Q8C4D8 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC22■■□□□ 1.11
Gm11541Q8C4D8 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC22■■□□□ 1.11
Gm11541Q8C4D8 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Gm11541Q8C4D8 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC21.99■■□□□ 1.11
Gm11541Q8C4D8 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC21.99■■□□□ 1.11
Gm11541Q8C4D8 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Gm11541Q8C4D8 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC21.98■■□□□ 1.11
Gm11541Q8C4D8 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
Gm11541Q8C4D8 Tdp2-203ENSMUST00000223804 1136 ntBASIC21.97■■□□□ 1.11
Gm11541Q8C4D8 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC21.96■■□□□ 1.11
Gm11541Q8C4D8 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Gm11541Q8C4D8 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC21.95■■□□□ 1.1
Gm11541Q8C4D8 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC21.95■■□□□ 1.1
Gm11541Q8C4D8 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Gm11541Q8C4D8 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Gm11541Q8C4D8 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
Gm11541Q8C4D8 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Gm11541Q8C4D8 Gm6345-201ENSMUST00000180378 1691 ntBASIC21.93■■□□□ 1.1
Gm11541Q8C4D8 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
Gm11541Q8C4D8 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Gm11541Q8C4D8 Fezf2-202ENSMUST00000224023 1917 ntBASIC21.92■■□□□ 1.1
Gm11541Q8C4D8 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Gm11541Q8C4D8 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC21.92■■□□□ 1.1
Gm11541Q8C4D8 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Gm11541Q8C4D8 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC21.91■■□□□ 1.1
Gm11541Q8C4D8 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Gm11541Q8C4D8 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
Gm11541Q8C4D8 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
Gm11541Q8C4D8 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Gm11541Q8C4D8 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Gm11541Q8C4D8 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Gm11541Q8C4D8 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Gm11541Q8C4D8 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Gm11541Q8C4D8 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Gm11541Q8C4D8 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC21.86■■□□□ 1.09
Gm11541Q8C4D8 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Gm11541Q8C4D8 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Gm11541Q8C4D8 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC21.85■■□□□ 1.09
Gm11541Q8C4D8 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Gm11541Q8C4D8 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC21.84■■□□□ 1.09
Gm11541Q8C4D8 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC21.84■■□□□ 1.09
Gm11541Q8C4D8 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC21.84■■□□□ 1.09
Gm11541Q8C4D8 Gm45855-201ENSMUST00000212546 880 ntBASIC21.83■■□□□ 1.09
Gm11541Q8C4D8 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC21.83■■□□□ 1.08
Gm11541Q8C4D8 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Gm11541Q8C4D8 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC21.82■■□□□ 1.08
Gm11541Q8C4D8 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Gm11541Q8C4D8 Gm9397-201ENSMUST00000200125 605 ntBASIC21.81■■□□□ 1.08
Gm11541Q8C4D8 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Gm11541Q8C4D8 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Gm11541Q8C4D8 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC21.79■■□□□ 1.08
Gm11541Q8C4D8 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Gm11541Q8C4D8 AC153890.1-201ENSMUST00000220021 2469 ntBASIC21.79■■□□□ 1.08
Gm11541Q8C4D8 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.08
Gm11541Q8C4D8 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.08
Gm11541Q8C4D8 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC21.77■■□□□ 1.08
Gm11541Q8C4D8 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Gm11541Q8C4D8 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
Gm11541Q8C4D8 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Gm11541Q8C4D8 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Gm11541Q8C4D8 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Gm11541Q8C4D8 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Gm11541Q8C4D8 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Gm11541Q8C4D8 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC21.74■■□□□ 1.07
Gm11541Q8C4D8 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Gm11541Q8C4D8 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Gm11541Q8C4D8 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Gm11541Q8C4D8 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
Retrieved 100 of 76,532 protein–RNA pairs in 61.2 ms