Protein–RNA interactions for Protein: Q6P8I4

Pcnp, PEST proteolytic signal-containing nuclear protein, mousemouse

Known RBP Predictions only

Length 178 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PcnpQ6P8I4 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PcnpQ6P8I4 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
PcnpQ6P8I4 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PcnpQ6P8I4 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
PcnpQ6P8I4 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
PcnpQ6P8I4 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
PcnpQ6P8I4 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
PcnpQ6P8I4 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PcnpQ6P8I4 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
PcnpQ6P8I4 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
PcnpQ6P8I4 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
PcnpQ6P8I4 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC20.75■□□□□ 0.91
PcnpQ6P8I4 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
PcnpQ6P8I4 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
PcnpQ6P8I4 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PcnpQ6P8I4 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PcnpQ6P8I4 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PcnpQ6P8I4 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
PcnpQ6P8I4 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
PcnpQ6P8I4 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC20.72■□□□□ 0.91
PcnpQ6P8I4 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PcnpQ6P8I4 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
PcnpQ6P8I4 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PcnpQ6P8I4 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PcnpQ6P8I4 Rab21-202ENSMUST00000218831 843 ntBASIC20.7■□□□□ 0.9
PcnpQ6P8I4 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
PcnpQ6P8I4 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
PcnpQ6P8I4 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PcnpQ6P8I4 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PcnpQ6P8I4 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PcnpQ6P8I4 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PcnpQ6P8I4 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PcnpQ6P8I4 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PcnpQ6P8I4 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
PcnpQ6P8I4 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PcnpQ6P8I4 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PcnpQ6P8I4 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PcnpQ6P8I4 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
PcnpQ6P8I4 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
PcnpQ6P8I4 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC20.65■□□□□ 0.9
PcnpQ6P8I4 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PcnpQ6P8I4 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
PcnpQ6P8I4 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
PcnpQ6P8I4 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
PcnpQ6P8I4 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
PcnpQ6P8I4 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
PcnpQ6P8I4 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
PcnpQ6P8I4 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
PcnpQ6P8I4 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
PcnpQ6P8I4 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PcnpQ6P8I4 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC20.61■□□□□ 0.89
PcnpQ6P8I4 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
PcnpQ6P8I4 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC20.6■□□□□ 0.89
PcnpQ6P8I4 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
PcnpQ6P8I4 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC20.6■□□□□ 0.89
PcnpQ6P8I4 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PcnpQ6P8I4 Gm17641-201ENSMUST00000166328 2350 ntBASIC20.6■□□□□ 0.89
PcnpQ6P8I4 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC20.6■□□□□ 0.89
PcnpQ6P8I4 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC20.59■□□□□ 0.89
PcnpQ6P8I4 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC20.58■□□□□ 0.88
PcnpQ6P8I4 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC20.57■□□□□ 0.88
PcnpQ6P8I4 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
PcnpQ6P8I4 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
PcnpQ6P8I4 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PcnpQ6P8I4 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
PcnpQ6P8I4 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
PcnpQ6P8I4 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
PcnpQ6P8I4 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC20.55■□□□□ 0.88
PcnpQ6P8I4 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC20.55■□□□□ 0.88
PcnpQ6P8I4 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PcnpQ6P8I4 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PcnpQ6P8I4 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PcnpQ6P8I4 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PcnpQ6P8I4 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PcnpQ6P8I4 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PcnpQ6P8I4 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
PcnpQ6P8I4 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PcnpQ6P8I4 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PcnpQ6P8I4 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC20.52■□□□□ 0.88
PcnpQ6P8I4 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
PcnpQ6P8I4 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC20.52■□□□□ 0.87
PcnpQ6P8I4 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
PcnpQ6P8I4 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC20.51■□□□□ 0.87
PcnpQ6P8I4 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
PcnpQ6P8I4 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
PcnpQ6P8I4 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
PcnpQ6P8I4 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
PcnpQ6P8I4 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PcnpQ6P8I4 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
PcnpQ6P8I4 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PcnpQ6P8I4 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
PcnpQ6P8I4 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
PcnpQ6P8I4 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PcnpQ6P8I4 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC20.48■□□□□ 0.87
PcnpQ6P8I4 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC20.48■□□□□ 0.87
PcnpQ6P8I4 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC20.47■□□□□ 0.87
PcnpQ6P8I4 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC20.47■□□□□ 0.87
PcnpQ6P8I4 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
PcnpQ6P8I4 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
PcnpQ6P8I4 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 9.2 ms