Protein–RNA interactions for Protein: Q62147

Sspn, Sarcospan, mousemouse

Predictions only

Length 216 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SspnQ62147 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
SspnQ62147 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC20.45■□□□□ 0.86
SspnQ62147 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC20.44■□□□□ 0.86
SspnQ62147 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC20.44■□□□□ 0.86
SspnQ62147 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
SspnQ62147 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC20.43■□□□□ 0.86
SspnQ62147 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC20.43■□□□□ 0.86
SspnQ62147 Amer2-203ENSMUST00000225247 2662 ntBASIC20.42■□□□□ 0.86
SspnQ62147 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SspnQ62147 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
SspnQ62147 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
SspnQ62147 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SspnQ62147 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SspnQ62147 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
SspnQ62147 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
SspnQ62147 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SspnQ62147 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
SspnQ62147 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC20.38■□□□□ 0.85
SspnQ62147 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
SspnQ62147 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SspnQ62147 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC20.37■□□□□ 0.85
SspnQ62147 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
SspnQ62147 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
SspnQ62147 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC20.36■□□□□ 0.85
SspnQ62147 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
SspnQ62147 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SspnQ62147 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SspnQ62147 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
SspnQ62147 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SspnQ62147 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
SspnQ62147 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
SspnQ62147 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
SspnQ62147 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SspnQ62147 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
SspnQ62147 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC20.31■□□□□ 0.84
SspnQ62147 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SspnQ62147 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
SspnQ62147 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC20.3■□□□□ 0.84
SspnQ62147 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SspnQ62147 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SspnQ62147 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
SspnQ62147 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
SspnQ62147 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SspnQ62147 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
SspnQ62147 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SspnQ62147 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SspnQ62147 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SspnQ62147 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC20.28■□□□□ 0.84
SspnQ62147 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SspnQ62147 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SspnQ62147 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SspnQ62147 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SspnQ62147 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
SspnQ62147 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
SspnQ62147 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC20.26■□□□□ 0.83
SspnQ62147 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC20.26■□□□□ 0.83
SspnQ62147 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
SspnQ62147 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
SspnQ62147 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
SspnQ62147 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
SspnQ62147 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC20.24■□□□□ 0.83
SspnQ62147 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
SspnQ62147 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
SspnQ62147 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SspnQ62147 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SspnQ62147 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
SspnQ62147 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC20.22■□□□□ 0.83
SspnQ62147 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
SspnQ62147 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SspnQ62147 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
SspnQ62147 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC20.21■□□□□ 0.83
SspnQ62147 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SspnQ62147 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SspnQ62147 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SspnQ62147 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
SspnQ62147 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SspnQ62147 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SspnQ62147 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
SspnQ62147 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
SspnQ62147 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
SspnQ62147 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SspnQ62147 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC20.17■□□□□ 0.82
SspnQ62147 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC20.17■□□□□ 0.82
SspnQ62147 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SspnQ62147 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
SspnQ62147 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
SspnQ62147 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SspnQ62147 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
SspnQ62147 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
SspnQ62147 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC20.13■□□□□ 0.81
SspnQ62147 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC20.13■□□□□ 0.81
SspnQ62147 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SspnQ62147 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SspnQ62147 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
SspnQ62147 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
SspnQ62147 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
SspnQ62147 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
SspnQ62147 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
SspnQ62147 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SspnQ62147 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 131.9 ms