Protein–RNA interactions for Protein: Q62147

Sspn, Sarcospan, mousemouse

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SspnQ62147 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
SspnQ62147 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC20.45■□□□□ 0.86
SspnQ62147 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC20.44■□□□□ 0.86
SspnQ62147 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC20.44■□□□□ 0.86
SspnQ62147 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
SspnQ62147 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC20.43■□□□□ 0.86
SspnQ62147 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC20.43■□□□□ 0.86
SspnQ62147 Amer2-203ENSMUST00000225247 2662 ntBASIC20.42■□□□□ 0.86
SspnQ62147 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SspnQ62147 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
SspnQ62147 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
SspnQ62147 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SspnQ62147 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SspnQ62147 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
SspnQ62147 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
SspnQ62147 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SspnQ62147 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
SspnQ62147 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC20.38■□□□□ 0.85
SspnQ62147 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
SspnQ62147 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SspnQ62147 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC20.37■□□□□ 0.85
SspnQ62147 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
SspnQ62147 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
SspnQ62147 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC20.36■□□□□ 0.85
SspnQ62147 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
SspnQ62147 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SspnQ62147 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SspnQ62147 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
SspnQ62147 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SspnQ62147 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
SspnQ62147 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
SspnQ62147 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
SspnQ62147 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SspnQ62147 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
SspnQ62147 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC20.31■□□□□ 0.84
SspnQ62147 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SspnQ62147 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
SspnQ62147 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC20.3■□□□□ 0.84
SspnQ62147 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SspnQ62147 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SspnQ62147 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
SspnQ62147 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
SspnQ62147 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SspnQ62147 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
SspnQ62147 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SspnQ62147 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SspnQ62147 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SspnQ62147 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC20.28■□□□□ 0.84
SspnQ62147 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SspnQ62147 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SspnQ62147 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SspnQ62147 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SspnQ62147 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
SspnQ62147 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
SspnQ62147 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC20.26■□□□□ 0.83
SspnQ62147 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC20.26■□□□□ 0.83
SspnQ62147 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
SspnQ62147 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
SspnQ62147 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
SspnQ62147 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
SspnQ62147 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC20.24■□□□□ 0.83
SspnQ62147 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
SspnQ62147 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
SspnQ62147 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SspnQ62147 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SspnQ62147 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
SspnQ62147 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC20.22■□□□□ 0.83
SspnQ62147 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
SspnQ62147 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SspnQ62147 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
SspnQ62147 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC20.21■□□□□ 0.83
SspnQ62147 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SspnQ62147 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SspnQ62147 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SspnQ62147 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
SspnQ62147 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SspnQ62147 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SspnQ62147 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
SspnQ62147 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
SspnQ62147 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
SspnQ62147 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SspnQ62147 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC20.17■□□□□ 0.82
SspnQ62147 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC20.17■□□□□ 0.82
SspnQ62147 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SspnQ62147 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
SspnQ62147 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
SspnQ62147 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SspnQ62147 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
SspnQ62147 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
SspnQ62147 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC20.13■□□□□ 0.81
SspnQ62147 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC20.13■□□□□ 0.81
SspnQ62147 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SspnQ62147 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SspnQ62147 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
SspnQ62147 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
SspnQ62147 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
SspnQ62147 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
SspnQ62147 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
SspnQ62147 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SspnQ62147 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 18.7 ms