Protein–RNA interactions for Protein: Q61080

Foxf1, Forkhead box protein F1, mousemouse

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxf1Q61080 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Foxf1Q61080 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.91
Foxf1Q61080 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
Foxf1Q61080 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Foxf1Q61080 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC20.75■□□□□ 0.91
Foxf1Q61080 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC20.75■□□□□ 0.91
Foxf1Q61080 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Foxf1Q61080 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC20.75■□□□□ 0.91
Foxf1Q61080 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Foxf1Q61080 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
Foxf1Q61080 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC20.74■□□□□ 0.91
Foxf1Q61080 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC20.74■□□□□ 0.91
Foxf1Q61080 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Foxf1Q61080 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Foxf1Q61080 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Foxf1Q61080 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Foxf1Q61080 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
Foxf1Q61080 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Foxf1Q61080 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Foxf1Q61080 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Foxf1Q61080 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Foxf1Q61080 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Foxf1Q61080 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Foxf1Q61080 Fezf2-202ENSMUST00000224023 1917 ntBASIC20.69■□□□□ 0.9
Foxf1Q61080 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC20.69■□□□□ 0.9
Foxf1Q61080 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Foxf1Q61080 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Foxf1Q61080 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Foxf1Q61080 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
Foxf1Q61080 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Foxf1Q61080 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Foxf1Q61080 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Foxf1Q61080 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Foxf1Q61080 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
Foxf1Q61080 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Foxf1Q61080 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Foxf1Q61080 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC20.66■□□□□ 0.9
Foxf1Q61080 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Foxf1Q61080 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Foxf1Q61080 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Foxf1Q61080 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Foxf1Q61080 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
Foxf1Q61080 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Foxf1Q61080 Zfp131-205ENSMUST00000223812 663 ntBASIC20.62■□□□□ 0.89
Foxf1Q61080 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Foxf1Q61080 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
Foxf1Q61080 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
Foxf1Q61080 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Foxf1Q61080 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Foxf1Q61080 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC20.59■□□□□ 0.89
Foxf1Q61080 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Foxf1Q61080 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Foxf1Q61080 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Foxf1Q61080 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
Foxf1Q61080 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Foxf1Q61080 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
Foxf1Q61080 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Foxf1Q61080 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Foxf1Q61080 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC20.55■□□□□ 0.88
Foxf1Q61080 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Foxf1Q61080 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Foxf1Q61080 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Foxf1Q61080 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Foxf1Q61080 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Foxf1Q61080 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC20.53■□□□□ 0.88
Foxf1Q61080 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Foxf1Q61080 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Foxf1Q61080 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Foxf1Q61080 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Foxf1Q61080 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
Foxf1Q61080 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Foxf1Q61080 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Foxf1Q61080 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Foxf1Q61080 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Foxf1Q61080 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Foxf1Q61080 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Foxf1Q61080 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Foxf1Q61080 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC20.49■□□□□ 0.87
Foxf1Q61080 AC153890.1-201ENSMUST00000220021 2469 ntBASIC20.49■□□□□ 0.87
Foxf1Q61080 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Foxf1Q61080 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC20.48■□□□□ 0.87
Foxf1Q61080 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Foxf1Q61080 Tdp2-203ENSMUST00000223804 1136 ntBASIC20.48■□□□□ 0.87
Foxf1Q61080 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Foxf1Q61080 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Foxf1Q61080 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Foxf1Q61080 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Foxf1Q61080 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Foxf1Q61080 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Foxf1Q61080 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC20.46■□□□□ 0.87
Foxf1Q61080 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Foxf1Q61080 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Foxf1Q61080 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Foxf1Q61080 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Foxf1Q61080 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Foxf1Q61080 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC20.44■□□□□ 0.86
Foxf1Q61080 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC20.43■□□□□ 0.86
Foxf1Q61080 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC20.43■□□□□ 0.86
Foxf1Q61080 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Foxf1Q61080 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 18.1 ms