Protein–RNA interactions for Protein: Q3UM89

Foxr2, Forkhead box protein R2, mousemouse

Predictions only

Length 302 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxr2Q3UM89 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
Foxr2Q3UM89 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC22.32■■□□□ 1.16
Foxr2Q3UM89 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC22.32■■□□□ 1.16
Foxr2Q3UM89 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC22.32■■□□□ 1.16
Foxr2Q3UM89 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Foxr2Q3UM89 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
Foxr2Q3UM89 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Foxr2Q3UM89 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC22.31■■□□□ 1.16
Foxr2Q3UM89 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC22.29■■□□□ 1.16
Foxr2Q3UM89 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Foxr2Q3UM89 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC22.28■■□□□ 1.16
Foxr2Q3UM89 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC22.28■■□□□ 1.16
Foxr2Q3UM89 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC22.28■■□□□ 1.16
Foxr2Q3UM89 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Foxr2Q3UM89 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
Foxr2Q3UM89 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC22.27■■□□□ 1.15
Foxr2Q3UM89 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
Foxr2Q3UM89 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
Foxr2Q3UM89 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC22.26■■□□□ 1.15
Foxr2Q3UM89 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Foxr2Q3UM89 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
Foxr2Q3UM89 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Foxr2Q3UM89 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
Foxr2Q3UM89 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC22.23■■□□□ 1.15
Foxr2Q3UM89 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC22.23■■□□□ 1.15
Foxr2Q3UM89 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Foxr2Q3UM89 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC22.22■■□□□ 1.15
Foxr2Q3UM89 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC22.21■■□□□ 1.15
Foxr2Q3UM89 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Foxr2Q3UM89 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
Foxr2Q3UM89 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
Foxr2Q3UM89 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Foxr2Q3UM89 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
Foxr2Q3UM89 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Foxr2Q3UM89 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Foxr2Q3UM89 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Foxr2Q3UM89 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Foxr2Q3UM89 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
Foxr2Q3UM89 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC22.14■■□□□ 1.14
Foxr2Q3UM89 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC22.14■■□□□ 1.14
Foxr2Q3UM89 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Foxr2Q3UM89 Zfp131-205ENSMUST00000223812 663 ntBASIC22.12■■□□□ 1.13
Foxr2Q3UM89 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC22.12■■□□□ 1.13
Foxr2Q3UM89 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC22.12■■□□□ 1.13
Foxr2Q3UM89 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Foxr2Q3UM89 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Foxr2Q3UM89 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Foxr2Q3UM89 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC22.1■■□□□ 1.13
Foxr2Q3UM89 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Foxr2Q3UM89 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
Foxr2Q3UM89 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC22.09■■□□□ 1.13
Foxr2Q3UM89 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Foxr2Q3UM89 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC22.08■■□□□ 1.13
Foxr2Q3UM89 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC22.08■■□□□ 1.13
Foxr2Q3UM89 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC22.08■■□□□ 1.13
Foxr2Q3UM89 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC22.08■■□□□ 1.12
Foxr2Q3UM89 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Foxr2Q3UM89 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC22.07■■□□□ 1.12
Foxr2Q3UM89 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Foxr2Q3UM89 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC22.07■■□□□ 1.12
Foxr2Q3UM89 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Foxr2Q3UM89 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Foxr2Q3UM89 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC22.05■■□□□ 1.12
Foxr2Q3UM89 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC22.05■■□□□ 1.12
Foxr2Q3UM89 Amer2-203ENSMUST00000225247 2662 ntBASIC22.03■■□□□ 1.12
Foxr2Q3UM89 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
Foxr2Q3UM89 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Foxr2Q3UM89 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
Foxr2Q3UM89 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Foxr2Q3UM89 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC22.01■■□□□ 1.11
Foxr2Q3UM89 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Foxr2Q3UM89 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Foxr2Q3UM89 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC22■■□□□ 1.11
Foxr2Q3UM89 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC22■■□□□ 1.11
Foxr2Q3UM89 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Foxr2Q3UM89 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC21.99■■□□□ 1.11
Foxr2Q3UM89 Gm9397-201ENSMUST00000200125 605 ntBASIC21.99■■□□□ 1.11
Foxr2Q3UM89 Tdp2-203ENSMUST00000223804 1136 ntBASIC21.99■■□□□ 1.11
Foxr2Q3UM89 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Foxr2Q3UM89 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Foxr2Q3UM89 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Foxr2Q3UM89 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC21.97■■□□□ 1.11
Foxr2Q3UM89 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
Foxr2Q3UM89 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Foxr2Q3UM89 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Foxr2Q3UM89 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
Foxr2Q3UM89 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC21.95■■□□□ 1.1
Foxr2Q3UM89 Fezf2-202ENSMUST00000224023 1917 ntBASIC21.95■■□□□ 1.1
Foxr2Q3UM89 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC21.95■■□□□ 1.1
Foxr2Q3UM89 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Foxr2Q3UM89 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
Foxr2Q3UM89 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC21.94■■□□□ 1.1
Foxr2Q3UM89 Gm43863-201ENSMUST00000203822 1192 ntBASIC21.94■■□□□ 1.1
Foxr2Q3UM89 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC21.93■■□□□ 1.1
Foxr2Q3UM89 Gm24970-201ENSMUST00000175582 82 ntBASIC21.93■■□□□ 1.1
Foxr2Q3UM89 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
Foxr2Q3UM89 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Foxr2Q3UM89 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Foxr2Q3UM89 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Foxr2Q3UM89 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Retrieved 100 of 76,532 protein–RNA pairs in 17.8 ms