Protein–RNA interactions for Protein: P82350

Sgca, Alpha-sarcoglycan, mousemouse

Predictions only

Length 387 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcaP82350 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
SgcaP82350 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SgcaP82350 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SgcaP82350 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC20.47■□□□□ 0.87
SgcaP82350 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
SgcaP82350 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SgcaP82350 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
SgcaP82350 AC153890.1-201ENSMUST00000220021 2469 ntBASIC20.44■□□□□ 0.86
SgcaP82350 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SgcaP82350 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
SgcaP82350 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SgcaP82350 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC20.41■□□□□ 0.86
SgcaP82350 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
SgcaP82350 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SgcaP82350 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SgcaP82350 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SgcaP82350 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SgcaP82350 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
SgcaP82350 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
SgcaP82350 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
SgcaP82350 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SgcaP82350 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SgcaP82350 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SgcaP82350 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC20.39■□□□□ 0.85
SgcaP82350 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SgcaP82350 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
SgcaP82350 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SgcaP82350 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SgcaP82350 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
SgcaP82350 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC20.37■□□□□ 0.85
SgcaP82350 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SgcaP82350 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SgcaP82350 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC20.37■□□□□ 0.85
SgcaP82350 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
SgcaP82350 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SgcaP82350 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
SgcaP82350 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SgcaP82350 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SgcaP82350 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC20.34■□□□□ 0.85
SgcaP82350 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC20.34■□□□□ 0.85
SgcaP82350 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
SgcaP82350 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC20.33■□□□□ 0.84
SgcaP82350 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
SgcaP82350 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
SgcaP82350 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SgcaP82350 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SgcaP82350 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SgcaP82350 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SgcaP82350 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
SgcaP82350 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
SgcaP82350 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SgcaP82350 Gm25262-201ENSMUST00000174934 133 ntBASIC20.3■□□□□ 0.84
SgcaP82350 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC20.3■□□□□ 0.84
SgcaP82350 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SgcaP82350 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SgcaP82350 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
SgcaP82350 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC20.28■□□□□ 0.84
SgcaP82350 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SgcaP82350 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SgcaP82350 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SgcaP82350 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SgcaP82350 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SgcaP82350 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
SgcaP82350 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
SgcaP82350 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC20.26■□□□□ 0.83
SgcaP82350 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
SgcaP82350 Gm30346-201ENSMUST00000218641 1699 ntBASIC20.26■□□□□ 0.83
SgcaP82350 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SgcaP82350 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SgcaP82350 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SgcaP82350 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC20.24■□□□□ 0.83
SgcaP82350 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SgcaP82350 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SgcaP82350 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SgcaP82350 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SgcaP82350 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SgcaP82350 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
SgcaP82350 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
SgcaP82350 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SgcaP82350 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
SgcaP82350 AC166822.3-201ENSMUST00000227394 661 ntBASIC20.2■□□□□ 0.82
SgcaP82350 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
SgcaP82350 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
SgcaP82350 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
SgcaP82350 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SgcaP82350 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
SgcaP82350 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SgcaP82350 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SgcaP82350 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
SgcaP82350 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC20.18■□□□□ 0.82
SgcaP82350 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SgcaP82350 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
SgcaP82350 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
SgcaP82350 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SgcaP82350 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SgcaP82350 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SgcaP82350 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SgcaP82350 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC20.15■□□□□ 0.82
SgcaP82350 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.82
SgcaP82350 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 660.5 ms