Protein–RNA interactions for Protein: P63154

Crnkl1, Crooked neck-like protein 1, mousemouse

Known RBP Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Crnkl1P63154 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC24.19■■□□□ 1.46
Crnkl1P63154 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
Crnkl1P63154 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
Crnkl1P63154 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC24.16■■□□□ 1.46
Crnkl1P63154 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC24.15■■□□□ 1.46
Crnkl1P63154 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.46
Crnkl1P63154 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC24.14■■□□□ 1.45
Crnkl1P63154 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
Crnkl1P63154 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
Crnkl1P63154 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC24.12■■□□□ 1.45
Crnkl1P63154 AC166822.3-201ENSMUST00000227394 661 ntBASIC24.11■■□□□ 1.45
Crnkl1P63154 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
Crnkl1P63154 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC24.1■■□□□ 1.45
Crnkl1P63154 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC24.1■■□□□ 1.45
Crnkl1P63154 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
Crnkl1P63154 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
Crnkl1P63154 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.44
Crnkl1P63154 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.44
Crnkl1P63154 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC24.07■■□□□ 1.44
Crnkl1P63154 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
Crnkl1P63154 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
Crnkl1P63154 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
Crnkl1P63154 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
Crnkl1P63154 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
Crnkl1P63154 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC24.05■■□□□ 1.44
Crnkl1P63154 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
Crnkl1P63154 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
Crnkl1P63154 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
Crnkl1P63154 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC24.01■■□□□ 1.43
Crnkl1P63154 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC24.01■■□□□ 1.43
Crnkl1P63154 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
Crnkl1P63154 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC24■■□□□ 1.43
Crnkl1P63154 Mipep-204ENSMUST00000225043 1548 ntBASIC24■■□□□ 1.43
Crnkl1P63154 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
Crnkl1P63154 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
Crnkl1P63154 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
Crnkl1P63154 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
Crnkl1P63154 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
Crnkl1P63154 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
Crnkl1P63154 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
Crnkl1P63154 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
Crnkl1P63154 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC23.95■■□□□ 1.43
Crnkl1P63154 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC23.95■■□□□ 1.43
Crnkl1P63154 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC23.95■■□□□ 1.42
Crnkl1P63154 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
Crnkl1P63154 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC23.95■■□□□ 1.42
Crnkl1P63154 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC23.94■■□□□ 1.42
Crnkl1P63154 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC23.94■■□□□ 1.42
Crnkl1P63154 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Crnkl1P63154 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Crnkl1P63154 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC23.94■■□□□ 1.42
Crnkl1P63154 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC23.93■■□□□ 1.42
Crnkl1P63154 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC23.92■■□□□ 1.42
Crnkl1P63154 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Crnkl1P63154 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Crnkl1P63154 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Crnkl1P63154 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Crnkl1P63154 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Crnkl1P63154 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC23.89■■□□□ 1.42
Crnkl1P63154 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
Crnkl1P63154 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Crnkl1P63154 Gm24804-201ENSMUST00000174982 85 ntBASIC23.87■■□□□ 1.41
Crnkl1P63154 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Crnkl1P63154 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC23.85■■□□□ 1.41
Crnkl1P63154 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC23.85■■□□□ 1.41
Crnkl1P63154 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC23.84■■□□□ 1.41
Crnkl1P63154 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Crnkl1P63154 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Crnkl1P63154 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC23.83■■□□□ 1.41
Crnkl1P63154 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC23.82■■□□□ 1.4
Crnkl1P63154 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC23.82■■□□□ 1.4
Crnkl1P63154 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC23.82■■□□□ 1.4
Crnkl1P63154 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Crnkl1P63154 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
Crnkl1P63154 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Crnkl1P63154 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Crnkl1P63154 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Crnkl1P63154 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Crnkl1P63154 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
Crnkl1P63154 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
Crnkl1P63154 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Crnkl1P63154 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Crnkl1P63154 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
Crnkl1P63154 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC23.74■■□□□ 1.39
Crnkl1P63154 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC23.74■■□□□ 1.39
Crnkl1P63154 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
Crnkl1P63154 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC23.74■■□□□ 1.39
Crnkl1P63154 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC23.73■■□□□ 1.39
Crnkl1P63154 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Crnkl1P63154 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Crnkl1P63154 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC23.72■■□□□ 1.39
Crnkl1P63154 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC23.72■■□□□ 1.39
Crnkl1P63154 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC23.72■■□□□ 1.39
Crnkl1P63154 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Crnkl1P63154 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
Crnkl1P63154 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC23.71■■□□□ 1.39
Crnkl1P63154 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Crnkl1P63154 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
Crnkl1P63154 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Crnkl1P63154 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Retrieved 100 of 76,532 protein–RNA pairs in 16 ms