Protein–RNA interactions for Protein: P63058

Thra, Thyroid hormone receptor alpha, mousemouse

Predictions only

Length 492 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ThraP63058 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
ThraP63058 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC24.86■■□□□ 1.57
ThraP63058 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
ThraP63058 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC24.85■■□□□ 1.57
ThraP63058 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC24.82■■□□□ 1.56
ThraP63058 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
ThraP63058 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC24.81■■□□□ 1.56
ThraP63058 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
ThraP63058 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC24.8■■□□□ 1.56
ThraP63058 Gm24970-201ENSMUST00000175582 82 ntBASIC24.8■■□□□ 1.56
ThraP63058 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC24.8■■□□□ 1.56
ThraP63058 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC24.8■■□□□ 1.56
ThraP63058 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
ThraP63058 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC24.79■■□□□ 1.56
ThraP63058 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC24.79■■□□□ 1.56
ThraP63058 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC24.79■■□□□ 1.56
ThraP63058 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
ThraP63058 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
ThraP63058 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC24.78■■□□□ 1.56
ThraP63058 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC24.77■■□□□ 1.56
ThraP63058 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC24.77■■□□□ 1.56
ThraP63058 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
ThraP63058 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
ThraP63058 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC24.74■■□□□ 1.55
ThraP63058 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
ThraP63058 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC24.74■■□□□ 1.55
ThraP63058 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC24.74■■□□□ 1.55
ThraP63058 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
ThraP63058 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
ThraP63058 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
ThraP63058 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
ThraP63058 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
ThraP63058 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
ThraP63058 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
ThraP63058 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
ThraP63058 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC24.69■■□□□ 1.54
ThraP63058 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC24.68■■□□□ 1.54
ThraP63058 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
ThraP63058 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC24.66■■□□□ 1.54
ThraP63058 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
ThraP63058 Amer2-203ENSMUST00000225247 2662 ntBASIC24.66■■□□□ 1.54
ThraP63058 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC24.66■■□□□ 1.54
ThraP63058 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC24.66■■□□□ 1.54
ThraP63058 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC24.66■■□□□ 1.54
ThraP63058 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
ThraP63058 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC24.63■■□□□ 1.53
ThraP63058 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
ThraP63058 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
ThraP63058 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
ThraP63058 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
ThraP63058 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC24.59■■□□□ 1.53
ThraP63058 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC24.58■■□□□ 1.53
ThraP63058 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC24.57■■□□□ 1.52
ThraP63058 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
ThraP63058 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
ThraP63058 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC24.55■■□□□ 1.52
ThraP63058 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC24.55■■□□□ 1.52
ThraP63058 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
ThraP63058 Gm6345-201ENSMUST00000180378 1691 ntBASIC24.54■■□□□ 1.52
ThraP63058 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
ThraP63058 Gm43863-201ENSMUST00000203822 1192 ntBASIC24.54■■□□□ 1.52
ThraP63058 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC24.54■■□□□ 1.52
ThraP63058 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
ThraP63058 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC24.51■■□□□ 1.51
ThraP63058 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
ThraP63058 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
ThraP63058 Fezf2-202ENSMUST00000224023 1917 ntBASIC24.5■■□□□ 1.51
ThraP63058 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC24.5■■□□□ 1.51
ThraP63058 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC24.49■■□□□ 1.51
ThraP63058 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC24.47■■□□□ 1.51
ThraP63058 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
ThraP63058 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC24.47■■□□□ 1.51
ThraP63058 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC24.47■■□□□ 1.51
ThraP63058 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.51
ThraP63058 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC24.45■■□□□ 1.5
ThraP63058 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC24.45■■□□□ 1.5
ThraP63058 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC24.44■■□□□ 1.5
ThraP63058 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC24.44■■□□□ 1.5
ThraP63058 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC24.44■■□□□ 1.5
ThraP63058 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
ThraP63058 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
ThraP63058 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
ThraP63058 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
ThraP63058 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
ThraP63058 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC24.43■■□□□ 1.5
ThraP63058 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
ThraP63058 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC24.42■■□□□ 1.5
ThraP63058 Gm9939-201ENSMUST00000067161 1154 ntBASIC24.42■■□□□ 1.5
ThraP63058 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
ThraP63058 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC24.4■■□□□ 1.5
ThraP63058 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC24.4■■□□□ 1.5
ThraP63058 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC24.4■■□□□ 1.5
ThraP63058 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
ThraP63058 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
ThraP63058 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC24.4■■□□□ 1.5
ThraP63058 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC24.39■■□□□ 1.5
ThraP63058 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
ThraP63058 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC24.37■■□□□ 1.49
ThraP63058 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
ThraP63058 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC24.37■■□□□ 1.49
Retrieved 100 of 76,532 protein–RNA pairs in 15.2 ms