Protein–RNA interactions for Protein: P52946

Pdx1, Pancreas/duodenum homeobox protein 1, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdx1P52946 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC24.68■■□□□ 1.54
Pdx1P52946 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
Pdx1P52946 Gm6206-201ENSMUST00000133472 2199 ntBASIC24.67■■□□□ 1.54
Pdx1P52946 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC24.66■■□□□ 1.54
Pdx1P52946 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC24.66■■□□□ 1.54
Pdx1P52946 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
Pdx1P52946 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
Pdx1P52946 Gm43445-201ENSMUST00000198564 2091 ntBASIC24.65■■□□□ 1.54
Pdx1P52946 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
Pdx1P52946 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC24.63■■□□□ 1.53
Pdx1P52946 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC24.63■■□□□ 1.53
Pdx1P52946 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
Pdx1P52946 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
Pdx1P52946 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
Pdx1P52946 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
Pdx1P52946 Gm9397-201ENSMUST00000200125 605 ntBASIC24.61■■□□□ 1.53
Pdx1P52946 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
Pdx1P52946 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC24.6■■□□□ 1.53
Pdx1P52946 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC24.6■■□□□ 1.53
Pdx1P52946 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
Pdx1P52946 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC24.59■■□□□ 1.53
Pdx1P52946 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC24.58■■□□□ 1.53
Pdx1P52946 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC24.58■■□□□ 1.52
Pdx1P52946 Gm9905-201ENSMUST00000065740 1845 ntBASIC24.57■■□□□ 1.52
Pdx1P52946 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
Pdx1P52946 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC24.55■■□□□ 1.52
Pdx1P52946 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
Pdx1P52946 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC24.55■■□□□ 1.52
Pdx1P52946 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC24.54■■□□□ 1.52
Pdx1P52946 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC24.53■■□□□ 1.52
Pdx1P52946 Gm45855-201ENSMUST00000212546 880 ntBASIC24.53■■□□□ 1.52
Pdx1P52946 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
Pdx1P52946 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
Pdx1P52946 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC24.51■■□□□ 1.51
Pdx1P52946 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
Pdx1P52946 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
Pdx1P52946 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC24.51■■□□□ 1.51
Pdx1P52946 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
Pdx1P52946 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
Pdx1P52946 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC24.49■■□□□ 1.51
Pdx1P52946 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC24.49■■□□□ 1.51
Pdx1P52946 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC24.49■■□□□ 1.51
Pdx1P52946 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Pdx1P52946 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Pdx1P52946 Gm43863-201ENSMUST00000203822 1192 ntBASIC24.46■■□□□ 1.51
Pdx1P52946 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
Pdx1P52946 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC24.46■■□□□ 1.51
Pdx1P52946 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
Pdx1P52946 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
Pdx1P52946 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
Pdx1P52946 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
Pdx1P52946 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC24.44■■□□□ 1.5
Pdx1P52946 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC24.44■■□□□ 1.5
Pdx1P52946 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
Pdx1P52946 Gm24970-201ENSMUST00000175582 82 ntBASIC24.43■■□□□ 1.5
Pdx1P52946 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC24.42■■□□□ 1.5
Pdx1P52946 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC24.42■■□□□ 1.5
Pdx1P52946 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC24.42■■□□□ 1.5
Pdx1P52946 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
Pdx1P52946 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC24.42■■□□□ 1.5
Pdx1P52946 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
Pdx1P52946 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
Pdx1P52946 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
Pdx1P52946 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC24.41■■□□□ 1.5
Pdx1P52946 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
Pdx1P52946 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC24.39■■□□□ 1.49
Pdx1P52946 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
Pdx1P52946 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Pdx1P52946 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC24.38■■□□□ 1.49
Pdx1P52946 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC24.37■■□□□ 1.49
Pdx1P52946 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC24.37■■□□□ 1.49
Pdx1P52946 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC24.36■■□□□ 1.49
Pdx1P52946 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC24.35■■□□□ 1.49
Pdx1P52946 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC24.35■■□□□ 1.49
Pdx1P52946 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Pdx1P52946 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Pdx1P52946 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC24.35■■□□□ 1.49
Pdx1P52946 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Pdx1P52946 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC24.34■■□□□ 1.49
Pdx1P52946 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
Pdx1P52946 AC157572.2-201ENSMUST00000226970 908 ntBASIC24.33■■□□□ 1.49
Pdx1P52946 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
Pdx1P52946 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
Pdx1P52946 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
Pdx1P52946 Amer2-203ENSMUST00000225247 2662 ntBASIC24.32■■□□□ 1.48
Pdx1P52946 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Pdx1P52946 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Pdx1P52946 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC24.29■■□□□ 1.48
Pdx1P52946 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Pdx1P52946 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Pdx1P52946 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Pdx1P52946 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC24.28■■□□□ 1.48
Pdx1P52946 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
Pdx1P52946 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Pdx1P52946 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC24.26■■□□□ 1.47
Pdx1P52946 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC24.26■■□□□ 1.47
Pdx1P52946 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
Pdx1P52946 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
Pdx1P52946 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
Pdx1P52946 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC24.25■■□□□ 1.47
Retrieved 100 of 76,532 protein–RNA pairs in 39.9 ms