Protein–RNA interactions for Protein: P35582

Foxa1, Hepatocyte nuclear factor 3-alpha, mousemouse

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxa1P35582 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
Foxa1P35582 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Foxa1P35582 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC23.01■■□□□ 1.27
Foxa1P35582 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Foxa1P35582 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC23■■□□□ 1.27
Foxa1P35582 Gm9397-201ENSMUST00000200125 605 ntBASIC23■■□□□ 1.27
Foxa1P35582 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC23■■□□□ 1.27
Foxa1P35582 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Foxa1P35582 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Foxa1P35582 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
Foxa1P35582 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC22.99■■□□□ 1.27
Foxa1P35582 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC22.99■■□□□ 1.27
Foxa1P35582 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
Foxa1P35582 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Foxa1P35582 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Foxa1P35582 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC22.97■■□□□ 1.27
Foxa1P35582 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Foxa1P35582 Gm43445-201ENSMUST00000198564 2091 ntBASIC22.96■■□□□ 1.27
Foxa1P35582 Gm45855-201ENSMUST00000212546 880 ntBASIC22.96■■□□□ 1.27
Foxa1P35582 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Foxa1P35582 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC22.96■■□□□ 1.27
Foxa1P35582 Gm6206-201ENSMUST00000133472 2199 ntBASIC22.95■■□□□ 1.26
Foxa1P35582 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC22.95■■□□□ 1.26
Foxa1P35582 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Foxa1P35582 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC22.94■■□□□ 1.26
Foxa1P35582 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC22.93■■□□□ 1.26
Foxa1P35582 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
Foxa1P35582 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
Foxa1P35582 Gm9905-201ENSMUST00000065740 1845 ntBASIC22.92■■□□□ 1.26
Foxa1P35582 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Foxa1P35582 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC22.9■■□□□ 1.26
Foxa1P35582 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC22.9■■□□□ 1.26
Foxa1P35582 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
Foxa1P35582 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC22.9■■□□□ 1.26
Foxa1P35582 Gm43863-201ENSMUST00000203822 1192 ntBASIC22.88■■□□□ 1.25
Foxa1P35582 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
Foxa1P35582 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC22.87■■□□□ 1.25
Foxa1P35582 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC22.86■■□□□ 1.25
Foxa1P35582 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC22.86■■□□□ 1.25
Foxa1P35582 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
Foxa1P35582 Gm24970-201ENSMUST00000175582 82 ntBASIC22.85■■□□□ 1.25
Foxa1P35582 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
Foxa1P35582 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC22.85■■□□□ 1.25
Foxa1P35582 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Foxa1P35582 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Foxa1P35582 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
Foxa1P35582 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC22.84■■□□□ 1.25
Foxa1P35582 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
Foxa1P35582 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC22.83■■□□□ 1.25
Foxa1P35582 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
Foxa1P35582 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
Foxa1P35582 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC22.82■■□□□ 1.24
Foxa1P35582 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC22.82■■□□□ 1.24
Foxa1P35582 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC22.82■■□□□ 1.24
Foxa1P35582 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC22.81■■□□□ 1.24
Foxa1P35582 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
Foxa1P35582 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
Foxa1P35582 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC22.8■■□□□ 1.24
Foxa1P35582 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
Foxa1P35582 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC22.8■■□□□ 1.24
Foxa1P35582 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
Foxa1P35582 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC22.79■■□□□ 1.24
Foxa1P35582 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC22.79■■□□□ 1.24
Foxa1P35582 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Foxa1P35582 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC22.78■■□□□ 1.24
Foxa1P35582 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC22.78■■□□□ 1.24
Foxa1P35582 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
Foxa1P35582 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC22.77■■□□□ 1.24
Foxa1P35582 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC22.77■■□□□ 1.24
Foxa1P35582 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC22.76■■□□□ 1.23
Foxa1P35582 AC157572.2-201ENSMUST00000226970 908 ntBASIC22.76■■□□□ 1.23
Foxa1P35582 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
Foxa1P35582 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC22.75■■□□□ 1.23
Foxa1P35582 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
Foxa1P35582 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC22.74■■□□□ 1.23
Foxa1P35582 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC22.74■■□□□ 1.23
Foxa1P35582 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
Foxa1P35582 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
Foxa1P35582 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC22.73■■□□□ 1.23
Foxa1P35582 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Foxa1P35582 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
Foxa1P35582 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC22.71■■□□□ 1.23
Foxa1P35582 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Foxa1P35582 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Foxa1P35582 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Foxa1P35582 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Foxa1P35582 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Foxa1P35582 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Foxa1P35582 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Foxa1P35582 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC22.66■■□□□ 1.22
Foxa1P35582 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Foxa1P35582 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC22.66■■□□□ 1.22
Foxa1P35582 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Foxa1P35582 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC22.64■■□□□ 1.21
Foxa1P35582 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC22.64■■□□□ 1.21
Foxa1P35582 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Foxa1P35582 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC22.63■■□□□ 1.21
Foxa1P35582 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Foxa1P35582 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Foxa1P35582 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC22.63■■□□□ 1.21
Retrieved 100 of 76,532 protein–RNA pairs in 14.1 ms