Protein–RNA interactions for Protein: P11276

Fn1, Fibronectin, mousemouse

Known RBP Predictions only

Length 2,477 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fn1P11276 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC20.12■□□□□ 0.81
Fn1P11276 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Fn1P11276 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC20.1■□□□□ 0.81
Fn1P11276 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Fn1P11276 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Fn1P11276 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Fn1P11276 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Fn1P11276 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
Fn1P11276 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC20.04■□□□□ 0.8
Fn1P11276 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Fn1P11276 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Fn1P11276 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC20■□□□□ 0.79
Fn1P11276 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC20■□□□□ 0.79
Fn1P11276 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Fn1P11276 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Fn1P11276 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Fn1P11276 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Fn1P11276 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC19.98■□□□□ 0.79
Fn1P11276 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Fn1P11276 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC19.98■□□□□ 0.79
Fn1P11276 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Fn1P11276 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC19.98■□□□□ 0.79
Fn1P11276 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC19.98■□□□□ 0.79
Fn1P11276 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Fn1P11276 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Fn1P11276 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC19.97■□□□□ 0.79
Fn1P11276 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Fn1P11276 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC19.94■□□□□ 0.78
Fn1P11276 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Fn1P11276 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Fn1P11276 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC19.93■□□□□ 0.78
Fn1P11276 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
Fn1P11276 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Fn1P11276 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC19.93■□□□□ 0.78
Fn1P11276 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC19.93■□□□□ 0.78
Fn1P11276 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC19.92■□□□□ 0.78
Fn1P11276 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Fn1P11276 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Fn1P11276 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Fn1P11276 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Fn1P11276 Gm6311-201ENSMUST00000073790 878 ntBASIC19.91■□□□□ 0.78
Fn1P11276 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC19.91■□□□□ 0.78
Fn1P11276 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Fn1P11276 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
Fn1P11276 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC19.89■□□□□ 0.77
Fn1P11276 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
Fn1P11276 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Fn1P11276 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC19.85■□□□□ 0.77
Fn1P11276 Gm22567-201ENSMUST00000175542 342 ntBASIC19.85■□□□□ 0.77
Fn1P11276 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Fn1P11276 AC167019.3-201ENSMUST00000228225 1266 ntBASIC19.85■□□□□ 0.77
Fn1P11276 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Fn1P11276 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC19.85■□□□□ 0.77
Fn1P11276 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
Fn1P11276 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
Fn1P11276 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Fn1P11276 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Fn1P11276 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
Fn1P11276 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Fn1P11276 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
Fn1P11276 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
Fn1P11276 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
Fn1P11276 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC19.81■□□□□ 0.76
Fn1P11276 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
Fn1P11276 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC19.8■□□□□ 0.76
Fn1P11276 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
Fn1P11276 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Fn1P11276 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Fn1P11276 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Fn1P11276 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Fn1P11276 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Fn1P11276 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Fn1P11276 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
Fn1P11276 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC19.77■□□□□ 0.76
Fn1P11276 Gm12366-201ENSMUST00000121722 873 ntBASIC19.77■□□□□ 0.76
Fn1P11276 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC19.77■□□□□ 0.76
Fn1P11276 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC19.77■□□□□ 0.76
Fn1P11276 Gm5786-201ENSMUST00000085368 882 ntBASIC19.77■□□□□ 0.76
Fn1P11276 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC19.76■□□□□ 0.75
Fn1P11276 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Fn1P11276 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Fn1P11276 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Fn1P11276 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Fn1P11276 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC19.75■□□□□ 0.75
Fn1P11276 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
Fn1P11276 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
Fn1P11276 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
Fn1P11276 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Fn1P11276 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
Fn1P11276 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Fn1P11276 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Fn1P11276 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Fn1P11276 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Fn1P11276 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Fn1P11276 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Fn1P11276 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Fn1P11276 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
Fn1P11276 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Fn1P11276 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Fn1P11276 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 12.3 ms