Protein–RNA interactions for Protein: P0CW02

Ly6c1, Lymphocyte antigen 6C1, mousemouse

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ly6c1P0CW02 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Ly6c1P0CW02 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Ly6c1P0CW02 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC20.91■□□□□ 0.94
Ly6c1P0CW02 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC20.91■□□□□ 0.94
Ly6c1P0CW02 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
Ly6c1P0CW02 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Ly6c1P0CW02 Gm24970-201ENSMUST00000175582 82 ntBASIC20.89■□□□□ 0.93
Ly6c1P0CW02 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC20.89■□□□□ 0.93
Ly6c1P0CW02 Gm43863-201ENSMUST00000203822 1192 ntBASIC20.88■□□□□ 0.93
Ly6c1P0CW02 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Ly6c1P0CW02 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
Ly6c1P0CW02 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC20.86■□□□□ 0.93
Ly6c1P0CW02 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC20.86■□□□□ 0.93
Ly6c1P0CW02 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
Ly6c1P0CW02 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
Ly6c1P0CW02 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Ly6c1P0CW02 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Ly6c1P0CW02 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Ly6c1P0CW02 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.93
Ly6c1P0CW02 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
Ly6c1P0CW02 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Ly6c1P0CW02 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Ly6c1P0CW02 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Ly6c1P0CW02 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC20.82■□□□□ 0.92
Ly6c1P0CW02 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Ly6c1P0CW02 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Ly6c1P0CW02 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC20.81■□□□□ 0.92
Ly6c1P0CW02 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
Ly6c1P0CW02 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Ly6c1P0CW02 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC20.79■□□□□ 0.92
Ly6c1P0CW02 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Ly6c1P0CW02 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Ly6c1P0CW02 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
Ly6c1P0CW02 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC20.78■□□□□ 0.92
Ly6c1P0CW02 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Ly6c1P0CW02 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Ly6c1P0CW02 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC20.77■□□□□ 0.92
Ly6c1P0CW02 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Ly6c1P0CW02 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Ly6c1P0CW02 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Ly6c1P0CW02 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Ly6c1P0CW02 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
Ly6c1P0CW02 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Ly6c1P0CW02 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Ly6c1P0CW02 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Ly6c1P0CW02 Zxda-201ENSMUST00000117281 2621 ntBASIC20.75■□□□□ 0.91
Ly6c1P0CW02 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
Ly6c1P0CW02 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Ly6c1P0CW02 AC157572.2-201ENSMUST00000226970 908 ntBASIC20.74■□□□□ 0.91
Ly6c1P0CW02 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Ly6c1P0CW02 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Ly6c1P0CW02 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC20.72■□□□□ 0.91
Ly6c1P0CW02 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ly6c1P0CW02 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ly6c1P0CW02 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC20.7■□□□□ 0.9
Ly6c1P0CW02 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Ly6c1P0CW02 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Ly6c1P0CW02 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ly6c1P0CW02 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ly6c1P0CW02 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC20.67■□□□□ 0.9
Ly6c1P0CW02 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC20.67■□□□□ 0.9
Ly6c1P0CW02 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Ly6c1P0CW02 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ly6c1P0CW02 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Ly6c1P0CW02 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Ly6c1P0CW02 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Ly6c1P0CW02 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
Ly6c1P0CW02 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Ly6c1P0CW02 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ly6c1P0CW02 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC20.63■□□□□ 0.89
Ly6c1P0CW02 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC20.63■□□□□ 0.89
Ly6c1P0CW02 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Ly6c1P0CW02 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ly6c1P0CW02 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Ly6c1P0CW02 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Ly6c1P0CW02 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Ly6c1P0CW02 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC20.61■□□□□ 0.89
Ly6c1P0CW02 Gm43445-201ENSMUST00000198564 2091 ntBASIC20.6■□□□□ 0.89
Ly6c1P0CW02 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC20.6■□□□□ 0.89
Ly6c1P0CW02 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ly6c1P0CW02 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC20.59■□□□□ 0.89
Ly6c1P0CW02 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC20.59■□□□□ 0.89
Ly6c1P0CW02 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ly6c1P0CW02 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Ly6c1P0CW02 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ly6c1P0CW02 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ly6c1P0CW02 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC20.58■□□□□ 0.89
Ly6c1P0CW02 Gm6206-201ENSMUST00000133472 2199 ntBASIC20.58■□□□□ 0.89
Ly6c1P0CW02 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ly6c1P0CW02 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
Ly6c1P0CW02 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC20.56■□□□□ 0.88
Ly6c1P0CW02 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ly6c1P0CW02 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Ly6c1P0CW02 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Ly6c1P0CW02 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ly6c1P0CW02 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Ly6c1P0CW02 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Ly6c1P0CW02 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Ly6c1P0CW02 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Ly6c1P0CW02 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 62.3 ms