Protein–RNA interactions for Protein: P04940

Ig kappa chain V-VI region NQ2-17.4.1, mousemouse

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04940 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
P04940 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC20.33■□□□□ 0.84
P04940 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
P04940 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
P04940 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
P04940 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC20.32■□□□□ 0.84
P04940 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
P04940 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC20.31■□□□□ 0.84
P04940 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
P04940 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC20.31■□□□□ 0.84
P04940 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC20.3■□□□□ 0.84
P04940 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
P04940 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
P04940 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
P04940 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC20.28■□□□□ 0.84
P04940 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
P04940 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
P04940 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
P04940 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
P04940 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC20.26■□□□□ 0.83
P04940 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
P04940 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC20.25■□□□□ 0.83
P04940 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
P04940 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
P04940 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
P04940 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
P04940 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
P04940 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
P04940 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC20.23■□□□□ 0.83
P04940 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC20.23■□□□□ 0.83
P04940 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC20.22■□□□□ 0.83
P04940 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
P04940 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
P04940 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
P04940 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
P04940 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
P04940 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
P04940 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
P04940 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
P04940 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
P04940 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
P04940 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
P04940 Amer2-203ENSMUST00000225247 2662 ntBASIC20.16■□□□□ 0.82
P04940 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
P04940 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC20.15■□□□□ 0.82
P04940 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
P04940 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
P04940 Zfp131-205ENSMUST00000223812 663 ntBASIC20.14■□□□□ 0.81
P04940 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
P04940 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC20.13■□□□□ 0.81
P04940 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
P04940 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
P04940 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
P04940 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC20.12■□□□□ 0.81
P04940 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
P04940 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC20.11■□□□□ 0.81
P04940 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC20.1■□□□□ 0.81
P04940 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
P04940 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
P04940 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
P04940 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
P04940 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
P04940 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC20.08■□□□□ 0.81
P04940 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
P04940 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
P04940 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
P04940 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
P04940 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC20.06■□□□□ 0.8
P04940 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC20.06■□□□□ 0.8
P04940 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
P04940 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
P04940 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC20.05■□□□□ 0.8
P04940 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
P04940 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
P04940 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
P04940 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
P04940 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
P04940 Tdp2-203ENSMUST00000223804 1136 ntBASIC20.03■□□□□ 0.8
P04940 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
P04940 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
P04940 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
P04940 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC20.02■□□□□ 0.8
P04940 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
P04940 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
P04940 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
P04940 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
P04940 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC20.01■□□□□ 0.79
P04940 Gm9397-201ENSMUST00000200125 605 ntBASIC20■□□□□ 0.79
P04940 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
P04940 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
P04940 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
P04940 Fezf2-202ENSMUST00000224023 1917 ntBASIC19.98■□□□□ 0.79
P04940 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
P04940 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
P04940 Gm43863-201ENSMUST00000203822 1192 ntBASIC19.98■□□□□ 0.79
P04940 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
P04940 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
P04940 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
P04940 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
P04940 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC19.97■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms