Protein–RNA interactions for Protein: P02831

Hoxa3, Homeobox protein Hox-A3, mousemouse

Predictions only

Length 443 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa3P02831 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Hoxa3P02831 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Hoxa3P02831 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC20.65■□□□□ 0.9
Hoxa3P02831 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
Hoxa3P02831 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Hoxa3P02831 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Hoxa3P02831 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
Hoxa3P02831 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Hoxa3P02831 Zxda-201ENSMUST00000117281 2621 ntBASIC20.62■□□□□ 0.89
Hoxa3P02831 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Hoxa3P02831 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Hoxa3P02831 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
Hoxa3P02831 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC20.6■□□□□ 0.89
Hoxa3P02831 AC157572.2-201ENSMUST00000226970 908 ntBASIC20.6■□□□□ 0.89
Hoxa3P02831 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Hoxa3P02831 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Hoxa3P02831 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
Hoxa3P02831 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Hoxa3P02831 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC20.59■□□□□ 0.89
Hoxa3P02831 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
Hoxa3P02831 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Hoxa3P02831 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Hoxa3P02831 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
Hoxa3P02831 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Hoxa3P02831 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Hoxa3P02831 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Hoxa3P02831 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Hoxa3P02831 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Hoxa3P02831 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Hoxa3P02831 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Hoxa3P02831 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC20.54■□□□□ 0.88
Hoxa3P02831 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Hoxa3P02831 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC20.53■□□□□ 0.88
Hoxa3P02831 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC20.52■□□□□ 0.88
Hoxa3P02831 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
Hoxa3P02831 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
Hoxa3P02831 Gm9939-201ENSMUST00000067161 1154 ntBASIC20.51■□□□□ 0.87
Hoxa3P02831 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Hoxa3P02831 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Hoxa3P02831 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Hoxa3P02831 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Hoxa3P02831 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Hoxa3P02831 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Hoxa3P02831 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Hoxa3P02831 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Hoxa3P02831 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Hoxa3P02831 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Hoxa3P02831 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Hoxa3P02831 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Hoxa3P02831 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Hoxa3P02831 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Hoxa3P02831 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Hoxa3P02831 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Hoxa3P02831 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.87
Hoxa3P02831 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Hoxa3P02831 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Hoxa3P02831 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC20.45■□□□□ 0.86
Hoxa3P02831 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Hoxa3P02831 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Hoxa3P02831 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Hoxa3P02831 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
Hoxa3P02831 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC20.42■□□□□ 0.86
Hoxa3P02831 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Hoxa3P02831 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
Hoxa3P02831 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Hoxa3P02831 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
Hoxa3P02831 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Hoxa3P02831 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Hoxa3P02831 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
Hoxa3P02831 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Hoxa3P02831 Gm8503-201ENSMUST00000118131 455 ntBASIC20.4■□□□□ 0.86
Hoxa3P02831 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC20.4■□□□□ 0.86
Hoxa3P02831 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Hoxa3P02831 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Hoxa3P02831 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
Hoxa3P02831 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
Hoxa3P02831 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Hoxa3P02831 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Hoxa3P02831 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
Hoxa3P02831 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Hoxa3P02831 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Hoxa3P02831 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Hoxa3P02831 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Hoxa3P02831 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Hoxa3P02831 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Hoxa3P02831 Gm6821-201ENSMUST00000107540 542 ntBASIC20.36■□□□□ 0.85
Hoxa3P02831 Gm42809-201ENSMUST00000198429 1138 ntBASIC20.36■□□□□ 0.85
Hoxa3P02831 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Hoxa3P02831 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Hoxa3P02831 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC20.35■□□□□ 0.85
Hoxa3P02831 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Hoxa3P02831 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC20.32■□□□□ 0.84
Hoxa3P02831 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
Hoxa3P02831 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Hoxa3P02831 Gm6345-201ENSMUST00000180378 1691 ntBASIC20.31■□□□□ 0.84
Hoxa3P02831 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Hoxa3P02831 Gm9905-201ENSMUST00000065740 1845 ntBASIC20.3■□□□□ 0.84
Hoxa3P02831 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC20.3■□□□□ 0.84
Hoxa3P02831 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC20.3■□□□□ 0.84
Hoxa3P02831 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 38 ms