Protein–RNA interactions for Protein: O70400

Pdlim1, PDZ and LIM domain protein 1, mousemouse

Predictions only

Length 327 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim1O70400 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
Pdlim1O70400 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC24.71■■□□□ 1.55
Pdlim1O70400 Gm45855-201ENSMUST00000212546 880 ntBASIC24.71■■□□□ 1.55
Pdlim1O70400 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC24.69■■□□□ 1.54
Pdlim1O70400 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
Pdlim1O70400 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
Pdlim1O70400 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
Pdlim1O70400 Gm24970-201ENSMUST00000175582 82 ntBASIC24.68■■□□□ 1.54
Pdlim1O70400 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
Pdlim1O70400 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC24.67■■□□□ 1.54
Pdlim1O70400 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC24.67■■□□□ 1.54
Pdlim1O70400 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC24.67■■□□□ 1.54
Pdlim1O70400 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
Pdlim1O70400 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
Pdlim1O70400 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC24.65■■□□□ 1.54
Pdlim1O70400 Zxda-201ENSMUST00000117281 2621 ntBASIC24.64■■□□□ 1.54
Pdlim1O70400 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC24.64■■□□□ 1.54
Pdlim1O70400 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
Pdlim1O70400 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
Pdlim1O70400 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC24.62■■□□□ 1.53
Pdlim1O70400 Gm43863-201ENSMUST00000203822 1192 ntBASIC24.62■■□□□ 1.53
Pdlim1O70400 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC24.61■■□□□ 1.53
Pdlim1O70400 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
Pdlim1O70400 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC24.59■■□□□ 1.53
Pdlim1O70400 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
Pdlim1O70400 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC24.57■■□□□ 1.52
Pdlim1O70400 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
Pdlim1O70400 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC24.56■■□□□ 1.52
Pdlim1O70400 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
Pdlim1O70400 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC24.55■■□□□ 1.52
Pdlim1O70400 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
Pdlim1O70400 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC24.55■■□□□ 1.52
Pdlim1O70400 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC24.54■■□□□ 1.52
Pdlim1O70400 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
Pdlim1O70400 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC24.54■■□□□ 1.52
Pdlim1O70400 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
Pdlim1O70400 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
Pdlim1O70400 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC24.52■■□□□ 1.52
Pdlim1O70400 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
Pdlim1O70400 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
Pdlim1O70400 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
Pdlim1O70400 AC157572.2-201ENSMUST00000226970 908 ntBASIC24.5■■□□□ 1.51
Pdlim1O70400 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC24.5■■□□□ 1.51
Pdlim1O70400 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC24.5■■□□□ 1.51
Pdlim1O70400 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Pdlim1O70400 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC24.49■■□□□ 1.51
Pdlim1O70400 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Pdlim1O70400 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC24.48■■□□□ 1.51
Pdlim1O70400 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC24.48■■□□□ 1.51
Pdlim1O70400 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
Pdlim1O70400 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC24.47■■□□□ 1.51
Pdlim1O70400 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC24.47■■□□□ 1.51
Pdlim1O70400 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC24.46■■□□□ 1.51
Pdlim1O70400 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
Pdlim1O70400 Gm43445-201ENSMUST00000198564 2091 ntBASIC24.45■■□□□ 1.5
Pdlim1O70400 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC24.45■■□□□ 1.5
Pdlim1O70400 Gm9905-201ENSMUST00000065740 1845 ntBASIC24.45■■□□□ 1.5
Pdlim1O70400 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC24.44■■□□□ 1.5
Pdlim1O70400 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC24.43■■□□□ 1.5
Pdlim1O70400 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Pdlim1O70400 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC24.43■■□□□ 1.5
Pdlim1O70400 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC24.42■■□□□ 1.5
Pdlim1O70400 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC24.41■■□□□ 1.5
Pdlim1O70400 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
Pdlim1O70400 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC24.41■■□□□ 1.5
Pdlim1O70400 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC24.4■■□□□ 1.5
Pdlim1O70400 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC24.4■■□□□ 1.5
Pdlim1O70400 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
Pdlim1O70400 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC24.39■■□□□ 1.49
Pdlim1O70400 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Pdlim1O70400 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC24.38■■□□□ 1.49
Pdlim1O70400 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Pdlim1O70400 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
Pdlim1O70400 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Pdlim1O70400 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
Pdlim1O70400 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
Pdlim1O70400 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Pdlim1O70400 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC24.35■■□□□ 1.49
Pdlim1O70400 Gm6206-201ENSMUST00000133472 2199 ntBASIC24.35■■□□□ 1.49
Pdlim1O70400 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC24.34■■□□□ 1.49
Pdlim1O70400 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
Pdlim1O70400 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
Pdlim1O70400 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC24.32■■□□□ 1.48
Pdlim1O70400 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Pdlim1O70400 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
Pdlim1O70400 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC24.31■■□□□ 1.48
Pdlim1O70400 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC24.31■■□□□ 1.48
Pdlim1O70400 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Pdlim1O70400 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Pdlim1O70400 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC24.3■■□□□ 1.48
Pdlim1O70400 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Pdlim1O70400 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
Pdlim1O70400 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
Pdlim1O70400 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
Pdlim1O70400 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Pdlim1O70400 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Pdlim1O70400 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC24.27■■□□□ 1.48
Pdlim1O70400 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC24.25■■□□□ 1.47
Pdlim1O70400 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC24.25■■□□□ 1.47
Pdlim1O70400 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
Retrieved 100 of 76,532 protein–RNA pairs in 93.8 ms