Protein–RNA interactions for Protein: O54908

Dkk1, Dickkopf-related protein 1, mousemouse

Predictions only

Length 272 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dkk1O54908 Zxda-201ENSMUST00000117281 2621 ntBASIC21,47■■□□□ 1,03
Dkk1O54908 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC21,47■■□□□ 1,03
Dkk1O54908 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC21,47■■□□□ 1,03
Dkk1O54908 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC21,47■■□□□ 1,03
Dkk1O54908 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC21,46■■□□□ 1,03
Dkk1O54908 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC21,46■■□□□ 1,03
Dkk1O54908 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC21,44■■□□□ 1,02
Dkk1O54908 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC21,44■■□□□ 1,02
Dkk1O54908 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC21,43■■□□□ 1,02
Dkk1O54908 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC21,43■■□□□ 1,02
Dkk1O54908 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC21,42■■□□□ 1,02
Dkk1O54908 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC21,42■■□□□ 1,02
Dkk1O54908 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC21,41■■□□□ 1,02
Dkk1O54908 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC21,4■■□□□ 1,02
Dkk1O54908 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC21,4■■□□□ 1,02
Dkk1O54908 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC21,4■■□□□ 1,02
Dkk1O54908 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC21,4■■□□□ 1,02
Dkk1O54908 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC21,38■■□□□ 1,01
Dkk1O54908 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC21,38■■□□□ 1,01
Dkk1O54908 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC21,37■■□□□ 1,01
Dkk1O54908 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC21,37■■□□□ 1,01
Dkk1O54908 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC21,37■■□□□ 1,01
Dkk1O54908 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC21,37■■□□□ 1,01
Dkk1O54908 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC21,36■■□□□ 1,01
Dkk1O54908 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC21,36■■□□□ 1,01
Dkk1O54908 Gm24970-201ENSMUST00000175582 82 ntBASIC21,35■■□□□ 1,01
Dkk1O54908 Gm45855-201ENSMUST00000212546 880 ntBASIC21,34■■□□□ 1,01
Dkk1O54908 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC21,34■■□□□ 1,01
Dkk1O54908 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC21,34■■□□□ 1,01
Dkk1O54908 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC21,33■■□□□ 1
Dkk1O54908 Gm43445-201ENSMUST00000198564 2091 ntBASIC21,32■■□□□ 1
Dkk1O54908 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC21,32■■□□□ 1
Dkk1O54908 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC21,32■■□□□ 1
Dkk1O54908 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC21,32■■□□□ 1
Dkk1O54908 Gm43863-201ENSMUST00000203822 1192 ntBASIC21,31■■□□□ 1
Dkk1O54908 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC21,31■■□□□ 1
Dkk1O54908 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC21,31■■□□□ 1
Dkk1O54908 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC21,31■■□□□ 1
Dkk1O54908 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC21,31■■□□□ 1
Dkk1O54908 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC21,31■■□□□ 1
Dkk1O54908 Gm6206-201ENSMUST00000133472 2199 ntBASIC21,3■■□□□ 1
Dkk1O54908 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC21,3■■□□□ 1
Dkk1O54908 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC21,3■■□□□ 1
Dkk1O54908 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC21,3■■□□□ 1
Dkk1O54908 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC21,3■■□□□ 1
Dkk1O54908 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC21,3■■□□□ 1
Dkk1O54908 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC21,29■■□□□ 1
Dkk1O54908 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC21,28■■□□□ 1
Dkk1O54908 Gm9905-201ENSMUST00000065740 1845 ntBASIC21,28■■□□□ 1
Dkk1O54908 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC21,28■■□□□ 1
Dkk1O54908 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC21,27■■□□□ 1
Dkk1O54908 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC21,27■■□□□ 1
Dkk1O54908 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC21,26■□□□□ 0,99
Dkk1O54908 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC21,26■□□□□ 0,99
Dkk1O54908 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC21,26■□□□□ 0,99
Dkk1O54908 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC21,26■□□□□ 0,99
Dkk1O54908 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC21,25■□□□□ 0,99
Dkk1O54908 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC21,25■□□□□ 0,99
Dkk1O54908 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC21,23■□□□□ 0,99
Dkk1O54908 Gm29179-208ENSMUST00000190450 1137 ntTSL 5 BASIC21,23■□□□□ 0,99
Dkk1O54908 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC21,23■□□□□ 0,99
Dkk1O54908 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC21,22■□□□□ 0,99
Dkk1O54908 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC21,22■□□□□ 0,99
Dkk1O54908 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC21,22■□□□□ 0,99
Dkk1O54908 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC21,21■□□□□ 0,99
Dkk1O54908 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC21,21■□□□□ 0,99
Dkk1O54908 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC21,21■□□□□ 0,99
Dkk1O54908 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC21,2■□□□□ 0,98
Dkk1O54908 AC157572.2-201ENSMUST00000226970 908 ntBASIC21,2■□□□□ 0,98
Dkk1O54908 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC21,2■□□□□ 0,98
Dkk1O54908 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC21,2■□□□□ 0,98
Dkk1O54908 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC21,2■□□□□ 0,98
Dkk1O54908 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC21,19■□□□□ 0,98
Dkk1O54908 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC21,18■□□□□ 0,98
Dkk1O54908 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC21,18■□□□□ 0,98
Dkk1O54908 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC21,18■□□□□ 0,98
Dkk1O54908 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC21,18■□□□□ 0,98
Dkk1O54908 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC21,17■□□□□ 0,98
Dkk1O54908 Gm28819-201ENSMUST00000186691 572 ntTSL 5 BASIC21,17■□□□□ 0,98
Dkk1O54908 Gm28840-208ENSMUST00000191514 738 ntTSL 1 (best) BASIC21,17■□□□□ 0,98
Dkk1O54908 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC21,16■□□□□ 0,98
Dkk1O54908 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC21,16■□□□□ 0,98
Dkk1O54908 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC21,13■□□□□ 0,97
Dkk1O54908 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC21,13■□□□□ 0,97
Dkk1O54908 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC21,13■□□□□ 0,97
Dkk1O54908 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC21,12■□□□□ 0,97
Dkk1O54908 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC21,12■□□□□ 0,97
Dkk1O54908 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC21,12■□□□□ 0,97
Dkk1O54908 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC21,11■□□□□ 0,97
Dkk1O54908 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC21,1■□□□□ 0,97
Dkk1O54908 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC21,1■□□□□ 0,97
Dkk1O54908 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC21,1■□□□□ 0,97
Dkk1O54908 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC21,1■□□□□ 0,97
Dkk1O54908 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC21,1■□□□□ 0,97
Dkk1O54908 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC21,09■□□□□ 0,97
Dkk1O54908 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC21,09■□□□□ 0,97
Dkk1O54908 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC21,09■□□□□ 0,97
Dkk1O54908 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC21,08■□□□□ 0,97
Dkk1O54908 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC21,08■□□□□ 0,97
Dkk1O54908 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC21,08■□□□□ 0,96
Retrieved 100 of 76,532 protein–RNA pairs in 11,3 ms