Protein–RNA interactions for Protein: O35627

Nr1i3, Nuclear receptor subfamily 1 group I member 3, mousemouse

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1i3O35627 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
Nr1i3O35627 Fezf2-202ENSMUST00000224023 1917 ntBASIC26.83■■□□□ 1.89
Nr1i3O35627 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC26.83■■□□□ 1.89
Nr1i3O35627 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC26.81■■□□□ 1.88
Nr1i3O35627 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC26.81■■□□□ 1.88
Nr1i3O35627 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC26.81■■□□□ 1.88
Nr1i3O35627 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC26.8■■□□□ 1.88
Nr1i3O35627 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
Nr1i3O35627 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC26.78■■□□□ 1.88
Nr1i3O35627 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
Nr1i3O35627 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
Nr1i3O35627 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
Nr1i3O35627 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC26.78■■□□□ 1.88
Nr1i3O35627 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC26.78■■□□□ 1.88
Nr1i3O35627 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC26.78■■□□□ 1.88
Nr1i3O35627 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
Nr1i3O35627 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC26.76■■□□□ 1.87
Nr1i3O35627 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC26.76■■□□□ 1.87
Nr1i3O35627 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
Nr1i3O35627 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC26.75■■□□□ 1.87
Nr1i3O35627 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC26.74■■□□□ 1.87
Nr1i3O35627 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
Nr1i3O35627 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC26.72■■□□□ 1.87
Nr1i3O35627 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC26.72■■□□□ 1.87
Nr1i3O35627 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC26.72■■□□□ 1.87
Nr1i3O35627 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.87
Nr1i3O35627 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC26.7■■□□□ 1.86
Nr1i3O35627 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
Nr1i3O35627 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
Nr1i3O35627 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC26.68■■□□□ 1.86
Nr1i3O35627 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC26.67■■□□□ 1.86
Nr1i3O35627 Gm16148-201ENSMUST00000119653 893 ntBASIC26.67■■□□□ 1.86
Nr1i3O35627 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
Nr1i3O35627 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC26.66■■□□□ 1.86
Nr1i3O35627 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
Nr1i3O35627 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC26.66■■□□□ 1.86
Nr1i3O35627 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
Nr1i3O35627 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC26.63■■□□□ 1.85
Nr1i3O35627 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
Nr1i3O35627 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
Nr1i3O35627 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC26.62■■□□□ 1.85
Nr1i3O35627 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
Nr1i3O35627 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
Nr1i3O35627 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
Nr1i3O35627 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
Nr1i3O35627 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
Nr1i3O35627 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
Nr1i3O35627 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC26.58■■□□□ 1.85
Nr1i3O35627 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
Nr1i3O35627 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
Nr1i3O35627 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
Nr1i3O35627 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
Nr1i3O35627 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
Nr1i3O35627 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC26.55■■□□□ 1.84
Nr1i3O35627 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
Nr1i3O35627 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
Nr1i3O35627 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC26.54■■□□□ 1.84
Nr1i3O35627 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC26.54■■□□□ 1.84
Nr1i3O35627 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC26.53■■□□□ 1.84
Nr1i3O35627 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
Nr1i3O35627 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
Nr1i3O35627 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
Nr1i3O35627 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
Nr1i3O35627 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
Nr1i3O35627 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
Nr1i3O35627 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC26.51■■□□□ 1.83
Nr1i3O35627 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
Nr1i3O35627 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
Nr1i3O35627 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
Nr1i3O35627 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
Nr1i3O35627 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
Nr1i3O35627 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
Nr1i3O35627 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
Nr1i3O35627 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC26.48■■□□□ 1.83
Nr1i3O35627 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
Nr1i3O35627 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC26.44■■□□□ 1.82
Nr1i3O35627 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
Nr1i3O35627 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC26.43■■□□□ 1.82
Nr1i3O35627 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
Nr1i3O35627 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
Nr1i3O35627 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
Nr1i3O35627 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
Nr1i3O35627 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
Nr1i3O35627 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC26.4■■□□□ 1.82
Nr1i3O35627 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
Nr1i3O35627 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
Nr1i3O35627 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC26.38■■□□□ 1.81
Nr1i3O35627 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
Nr1i3O35627 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
Nr1i3O35627 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC26.36■■□□□ 1.81
Nr1i3O35627 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
Nr1i3O35627 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC26.35■■□□□ 1.81
Nr1i3O35627 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC26.35■■□□□ 1.81
Nr1i3O35627 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC26.35■■□□□ 1.81
Nr1i3O35627 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
Nr1i3O35627 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
Nr1i3O35627 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
Nr1i3O35627 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.8
Nr1i3O35627 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
Nr1i3O35627 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
Retrieved 100 of 76,532 protein–RNA pairs in 10.5 ms