Protein–RNA interactions for Protein: K7N6K7

Sirpb1c, Signal-regulatory protein beta 1C, mousemouse

Predictions only

Length 397 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sirpb1cK7N6K7 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Sirpb1cK7N6K7 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC21.52■■□□□ 1.04
Sirpb1cK7N6K7 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.04
Sirpb1cK7N6K7 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC21.51■■□□□ 1.03
Sirpb1cK7N6K7 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
Sirpb1cK7N6K7 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
Sirpb1cK7N6K7 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
Sirpb1cK7N6K7 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
Sirpb1cK7N6K7 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Sirpb1cK7N6K7 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Sirpb1cK7N6K7 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
Sirpb1cK7N6K7 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Sirpb1cK7N6K7 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC21.47■■□□□ 1.03
Sirpb1cK7N6K7 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Sirpb1cK7N6K7 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
Sirpb1cK7N6K7 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Sirpb1cK7N6K7 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC21.47■■□□□ 1.03
Sirpb1cK7N6K7 Gm6345-201ENSMUST00000180378 1691 ntBASIC21.47■■□□□ 1.03
Sirpb1cK7N6K7 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
Sirpb1cK7N6K7 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Sirpb1cK7N6K7 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC21.45■■□□□ 1.02
Sirpb1cK7N6K7 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC21.44■■□□□ 1.02
Sirpb1cK7N6K7 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Sirpb1cK7N6K7 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Sirpb1cK7N6K7 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC21.42■■□□□ 1.02
Sirpb1cK7N6K7 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Sirpb1cK7N6K7 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Sirpb1cK7N6K7 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC21.41■■□□□ 1.02
Sirpb1cK7N6K7 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Sirpb1cK7N6K7 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Sirpb1cK7N6K7 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Sirpb1cK7N6K7 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Sirpb1cK7N6K7 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC21.39■■□□□ 1.01
Sirpb1cK7N6K7 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
Sirpb1cK7N6K7 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Sirpb1cK7N6K7 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Sirpb1cK7N6K7 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Sirpb1cK7N6K7 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Sirpb1cK7N6K7 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Sirpb1cK7N6K7 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Sirpb1cK7N6K7 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Sirpb1cK7N6K7 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Sirpb1cK7N6K7 Gm9397-201ENSMUST00000200125 605 ntBASIC21.34■■□□□ 1.01
Sirpb1cK7N6K7 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Sirpb1cK7N6K7 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC21.34■■□□□ 1.01
Sirpb1cK7N6K7 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Sirpb1cK7N6K7 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Sirpb1cK7N6K7 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC21.33■■□□□ 1.01
Sirpb1cK7N6K7 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC21.33■■□□□ 1.01
Sirpb1cK7N6K7 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC21.33■■□□□ 1.01
Sirpb1cK7N6K7 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC21.33■■□□□ 1
Sirpb1cK7N6K7 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Sirpb1cK7N6K7 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
Sirpb1cK7N6K7 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC21.31■■□□□ 1
Sirpb1cK7N6K7 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Sirpb1cK7N6K7 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC21.31■■□□□ 1
Sirpb1cK7N6K7 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC21.3■■□□□ 1
Sirpb1cK7N6K7 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
Sirpb1cK7N6K7 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC21.29■■□□□ 1
Sirpb1cK7N6K7 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Sirpb1cK7N6K7 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC21.29■■□□□ 1
Sirpb1cK7N6K7 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC21.29■■□□□ 1
Sirpb1cK7N6K7 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC21.29■■□□□ 1
Sirpb1cK7N6K7 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC21.28■■□□□ 1
Sirpb1cK7N6K7 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
Sirpb1cK7N6K7 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Sirpb1cK7N6K7 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Sirpb1cK7N6K7 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC21.27■■□□□ 1
Sirpb1cK7N6K7 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Sirpb1cK7N6K7 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Sirpb1cK7N6K7 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
Sirpb1cK7N6K7 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
Sirpb1cK7N6K7 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Sirpb1cK7N6K7 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Sirpb1cK7N6K7 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC21.24■□□□□ 0.99
Sirpb1cK7N6K7 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Sirpb1cK7N6K7 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Sirpb1cK7N6K7 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Sirpb1cK7N6K7 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
Sirpb1cK7N6K7 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Sirpb1cK7N6K7 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Sirpb1cK7N6K7 AC153890.1-201ENSMUST00000220021 2469 ntBASIC21.22■□□□□ 0.99
Sirpb1cK7N6K7 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC21.22■□□□□ 0.99
Sirpb1cK7N6K7 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC21.21■□□□□ 0.99
Sirpb1cK7N6K7 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Sirpb1cK7N6K7 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC21.21■□□□□ 0.99
Sirpb1cK7N6K7 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Sirpb1cK7N6K7 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Sirpb1cK7N6K7 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Sirpb1cK7N6K7 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Sirpb1cK7N6K7 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Sirpb1cK7N6K7 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Sirpb1cK7N6K7 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Sirpb1cK7N6K7 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
Sirpb1cK7N6K7 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC21.18■□□□□ 0.98
Sirpb1cK7N6K7 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC21.18■□□□□ 0.98
Sirpb1cK7N6K7 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Sirpb1cK7N6K7 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
Sirpb1cK7N6K7 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Sirpb1cK7N6K7 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 76.1 ms