Protein–RNA interactions for Protein: J3QNG1

Gm6408, Predicted gene 6408, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm6408J3QNG1 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
Gm6408J3QNG1 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
Gm6408J3QNG1 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
Gm6408J3QNG1 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
Gm6408J3QNG1 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
Gm6408J3QNG1 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
Gm6408J3QNG1 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC24.67■■□□□ 1.54
Gm6408J3QNG1 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC24.67■■□□□ 1.54
Gm6408J3QNG1 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
Gm6408J3QNG1 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
Gm6408J3QNG1 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
Gm6408J3QNG1 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC24.65■■□□□ 1.54
Gm6408J3QNG1 Gm16148-201ENSMUST00000119653 893 ntBASIC24.65■■□□□ 1.54
Gm6408J3QNG1 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
Gm6408J3QNG1 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC24.63■■□□□ 1.53
Gm6408J3QNG1 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC24.63■■□□□ 1.53
Gm6408J3QNG1 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
Gm6408J3QNG1 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
Gm6408J3QNG1 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC24.62■■□□□ 1.53
Gm6408J3QNG1 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC24.62■■□□□ 1.53
Gm6408J3QNG1 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC24.62■■□□□ 1.53
Gm6408J3QNG1 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
Gm6408J3QNG1 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC24.61■■□□□ 1.53
Gm6408J3QNG1 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC24.61■■□□□ 1.53
Gm6408J3QNG1 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
Gm6408J3QNG1 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC24.59■■□□□ 1.53
Gm6408J3QNG1 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC24.58■■□□□ 1.53
Gm6408J3QNG1 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
Gm6408J3QNG1 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.52
Gm6408J3QNG1 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC24.57■■□□□ 1.52
Gm6408J3QNG1 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
Gm6408J3QNG1 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
Gm6408J3QNG1 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
Gm6408J3QNG1 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
Gm6408J3QNG1 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
Gm6408J3QNG1 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
Gm6408J3QNG1 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
Gm6408J3QNG1 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC24.54■■□□□ 1.52
Gm6408J3QNG1 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC24.54■■□□□ 1.52
Gm6408J3QNG1 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
Gm6408J3QNG1 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC24.52■■□□□ 1.52
Gm6408J3QNG1 Fezf2-202ENSMUST00000224023 1917 ntBASIC24.52■■□□□ 1.52
Gm6408J3QNG1 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC24.52■■□□□ 1.52
Gm6408J3QNG1 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
Gm6408J3QNG1 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC24.5■■□□□ 1.51
Gm6408J3QNG1 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
Gm6408J3QNG1 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
Gm6408J3QNG1 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Gm6408J3QNG1 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC24.48■■□□□ 1.51
Gm6408J3QNG1 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC24.47■■□□□ 1.51
Gm6408J3QNG1 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Gm6408J3QNG1 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Gm6408J3QNG1 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC24.46■■□□□ 1.51
Gm6408J3QNG1 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC24.46■■□□□ 1.51
Gm6408J3QNG1 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
Gm6408J3QNG1 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
Gm6408J3QNG1 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
Gm6408J3QNG1 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
Gm6408J3QNG1 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
Gm6408J3QNG1 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC24.44■■□□□ 1.5
Gm6408J3QNG1 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC24.44■■□□□ 1.5
Gm6408J3QNG1 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Gm6408J3QNG1 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Gm6408J3QNG1 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC24.41■■□□□ 1.5
Gm6408J3QNG1 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
Gm6408J3QNG1 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Gm6408J3QNG1 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Gm6408J3QNG1 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
Gm6408J3QNG1 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
Gm6408J3QNG1 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC24.38■■□□□ 1.49
Gm6408J3QNG1 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Gm6408J3QNG1 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Gm6408J3QNG1 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
Gm6408J3QNG1 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC24.37■■□□□ 1.49
Gm6408J3QNG1 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
Gm6408J3QNG1 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC24.36■■□□□ 1.49
Gm6408J3QNG1 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
Gm6408J3QNG1 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Gm6408J3QNG1 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Gm6408J3QNG1 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Gm6408J3QNG1 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
Gm6408J3QNG1 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC24.34■■□□□ 1.49
Gm6408J3QNG1 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Gm6408J3QNG1 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Gm6408J3QNG1 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC24.33■■□□□ 1.48
Gm6408J3QNG1 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Gm6408J3QNG1 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC24.32■■□□□ 1.48
Gm6408J3QNG1 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC24.32■■□□□ 1.48
Gm6408J3QNG1 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
Gm6408J3QNG1 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
Gm6408J3QNG1 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Gm6408J3QNG1 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Gm6408J3QNG1 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
Gm6408J3QNG1 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC24.28■■□□□ 1.48
Gm6408J3QNG1 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC24.28■■□□□ 1.48
Gm6408J3QNG1 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC24.28■■□□□ 1.48
Gm6408J3QNG1 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
Gm6408J3QNG1 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
Gm6408J3QNG1 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC24.27■■□□□ 1.48
Gm6408J3QNG1 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms