Protein–RNA interactions for Protein: J3QMS9

E030018B13Rik, RIKEN cDNA E030018B13 gene, mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
E030018B13RikJ3QMS9 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
E030018B13RikJ3QMS9 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
E030018B13RikJ3QMS9 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
E030018B13RikJ3QMS9 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC20.38■□□□□ 0.85
E030018B13RikJ3QMS9 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
E030018B13RikJ3QMS9 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
E030018B13RikJ3QMS9 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC20.37■□□□□ 0.85
E030018B13RikJ3QMS9 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
E030018B13RikJ3QMS9 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC20.35■□□□□ 0.85
E030018B13RikJ3QMS9 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
E030018B13RikJ3QMS9 Gm43863-201ENSMUST00000203822 1192 ntBASIC20.34■□□□□ 0.85
E030018B13RikJ3QMS9 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
E030018B13RikJ3QMS9 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
E030018B13RikJ3QMS9 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
E030018B13RikJ3QMS9 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
E030018B13RikJ3QMS9 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.84
E030018B13RikJ3QMS9 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
E030018B13RikJ3QMS9 Zxda-201ENSMUST00000117281 2621 ntBASIC20.3■□□□□ 0.84
E030018B13RikJ3QMS9 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
E030018B13RikJ3QMS9 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
E030018B13RikJ3QMS9 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC20.3■□□□□ 0.84
E030018B13RikJ3QMS9 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
E030018B13RikJ3QMS9 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
E030018B13RikJ3QMS9 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
E030018B13RikJ3QMS9 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC20.28■□□□□ 0.84
E030018B13RikJ3QMS9 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC20.28■□□□□ 0.84
E030018B13RikJ3QMS9 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
E030018B13RikJ3QMS9 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
E030018B13RikJ3QMS9 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
E030018B13RikJ3QMS9 AC157572.2-201ENSMUST00000226970 908 ntBASIC20.26■□□□□ 0.83
E030018B13RikJ3QMS9 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
E030018B13RikJ3QMS9 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC20.26■□□□□ 0.83
E030018B13RikJ3QMS9 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
E030018B13RikJ3QMS9 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC20.24■□□□□ 0.83
E030018B13RikJ3QMS9 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
E030018B13RikJ3QMS9 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
E030018B13RikJ3QMS9 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
E030018B13RikJ3QMS9 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC20.23■□□□□ 0.83
E030018B13RikJ3QMS9 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
E030018B13RikJ3QMS9 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
E030018B13RikJ3QMS9 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
E030018B13RikJ3QMS9 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC20.22■□□□□ 0.83
E030018B13RikJ3QMS9 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC20.22■□□□□ 0.83
E030018B13RikJ3QMS9 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC20.21■□□□□ 0.83
E030018B13RikJ3QMS9 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
E030018B13RikJ3QMS9 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
E030018B13RikJ3QMS9 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
E030018B13RikJ3QMS9 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
E030018B13RikJ3QMS9 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC20.18■□□□□ 0.82
E030018B13RikJ3QMS9 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
E030018B13RikJ3QMS9 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC20.17■□□□□ 0.82
E030018B13RikJ3QMS9 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
E030018B13RikJ3QMS9 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
E030018B13RikJ3QMS9 Gm9905-201ENSMUST00000065740 1845 ntBASIC20.16■□□□□ 0.82
E030018B13RikJ3QMS9 Gm43445-201ENSMUST00000198564 2091 ntBASIC20.15■□□□□ 0.82
E030018B13RikJ3QMS9 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
E030018B13RikJ3QMS9 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
E030018B13RikJ3QMS9 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC20.15■□□□□ 0.82
E030018B13RikJ3QMS9 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
E030018B13RikJ3QMS9 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
E030018B13RikJ3QMS9 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
E030018B13RikJ3QMS9 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
E030018B13RikJ3QMS9 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
E030018B13RikJ3QMS9 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC20.12■□□□□ 0.81
E030018B13RikJ3QMS9 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
E030018B13RikJ3QMS9 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
E030018B13RikJ3QMS9 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
E030018B13RikJ3QMS9 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC20.1■□□□□ 0.81
E030018B13RikJ3QMS9 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
E030018B13RikJ3QMS9 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
E030018B13RikJ3QMS9 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC20.09■□□□□ 0.81
E030018B13RikJ3QMS9 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
E030018B13RikJ3QMS9 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC20.09■□□□□ 0.81
E030018B13RikJ3QMS9 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC20.09■□□□□ 0.81
E030018B13RikJ3QMS9 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
E030018B13RikJ3QMS9 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.8
E030018B13RikJ3QMS9 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC20.08■□□□□ 0.8
E030018B13RikJ3QMS9 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC20.07■□□□□ 0.8
E030018B13RikJ3QMS9 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
E030018B13RikJ3QMS9 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC20.07■□□□□ 0.8
E030018B13RikJ3QMS9 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC20.07■□□□□ 0.8
E030018B13RikJ3QMS9 Gm6206-201ENSMUST00000133472 2199 ntBASIC20.06■□□□□ 0.8
E030018B13RikJ3QMS9 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
E030018B13RikJ3QMS9 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
E030018B13RikJ3QMS9 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
E030018B13RikJ3QMS9 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
E030018B13RikJ3QMS9 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC20.04■□□□□ 0.8
E030018B13RikJ3QMS9 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
E030018B13RikJ3QMS9 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
E030018B13RikJ3QMS9 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
E030018B13RikJ3QMS9 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
E030018B13RikJ3QMS9 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
E030018B13RikJ3QMS9 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
E030018B13RikJ3QMS9 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
E030018B13RikJ3QMS9 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
E030018B13RikJ3QMS9 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
E030018B13RikJ3QMS9 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
E030018B13RikJ3QMS9 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
E030018B13RikJ3QMS9 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC20■□□□□ 0.79
E030018B13RikJ3QMS9 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 13.5 ms