Protein–RNA interactions for Protein: E9Q555

Rnf213, E3 ubiquitin-protein ligase RNF213, mousemouse

Known RBP Predictions only

Length 5,152 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf213E9Q555 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rnf213E9Q555 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC12.73□□□□□ -0.37
Rnf213E9Q555 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Rnf213E9Q555 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC12.7□□□□□ -0.38
Rnf213E9Q555 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC12.7□□□□□ -0.38
Rnf213E9Q555 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Rnf213E9Q555 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rnf213E9Q555 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC12.67□□□□□ -0.38
Rnf213E9Q555 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Rnf213E9Q555 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC12.67□□□□□ -0.38
Rnf213E9Q555 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC12.67□□□□□ -0.38
Rnf213E9Q555 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC12.67□□□□□ -0.38
Rnf213E9Q555 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rnf213E9Q555 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC12.66□□□□□ -0.38
Rnf213E9Q555 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rnf213E9Q555 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rnf213E9Q555 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC12.65□□□□□ -0.38
Rnf213E9Q555 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC12.65□□□□□ -0.38
Rnf213E9Q555 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rnf213E9Q555 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC12.64□□□□□ -0.39
Rnf213E9Q555 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rnf213E9Q555 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Rnf213E9Q555 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rnf213E9Q555 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC12.64□□□□□ -0.39
Rnf213E9Q555 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rnf213E9Q555 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rnf213E9Q555 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rnf213E9Q555 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rnf213E9Q555 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rnf213E9Q555 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
Rnf213E9Q555 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Rnf213E9Q555 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Rnf213E9Q555 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Rnf213E9Q555 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rnf213E9Q555 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Rnf213E9Q555 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Rnf213E9Q555 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Rnf213E9Q555 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Rnf213E9Q555 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rnf213E9Q555 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Rnf213E9Q555 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Rnf213E9Q555 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC12.58□□□□□ -0.39
Rnf213E9Q555 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Rnf213E9Q555 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Rnf213E9Q555 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Rnf213E9Q555 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC12.57□□□□□ -0.4
Rnf213E9Q555 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rnf213E9Q555 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC12.56□□□□□ -0.4
Rnf213E9Q555 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rnf213E9Q555 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Rnf213E9Q555 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rnf213E9Q555 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rnf213E9Q555 Gm22567-201ENSMUST00000175542 342 ntBASIC12.56□□□□□ -0.4
Rnf213E9Q555 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Rnf213E9Q555 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Rnf213E9Q555 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC12.55□□□□□ -0.4
Rnf213E9Q555 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Rnf213E9Q555 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rnf213E9Q555 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rnf213E9Q555 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
Rnf213E9Q555 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Rnf213E9Q555 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rnf213E9Q555 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rnf213E9Q555 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Rnf213E9Q555 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Rnf213E9Q555 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rnf213E9Q555 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Rnf213E9Q555 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC12.53□□□□□ -0.4
Rnf213E9Q555 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Rnf213E9Q555 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rnf213E9Q555 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC12.53□□□□□ -0.4
Rnf213E9Q555 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Rnf213E9Q555 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.4
Rnf213E9Q555 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Rnf213E9Q555 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Rnf213E9Q555 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Rnf213E9Q555 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rnf213E9Q555 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rnf213E9Q555 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Rnf213E9Q555 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Rnf213E9Q555 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Rnf213E9Q555 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC12.5□□□□□ -0.41
Rnf213E9Q555 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC12.5□□□□□ -0.41
Rnf213E9Q555 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC12.49□□□□□ -0.41
Rnf213E9Q555 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Rnf213E9Q555 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Rnf213E9Q555 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Rnf213E9Q555 Gm4799-201ENSMUST00000095396 657 ntBASIC12.49□□□□□ -0.41
Rnf213E9Q555 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Rnf213E9Q555 Gm6311-201ENSMUST00000073790 878 ntBASIC12.48□□□□□ -0.41
Rnf213E9Q555 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC12.48□□□□□ -0.41
Rnf213E9Q555 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Rnf213E9Q555 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Rnf213E9Q555 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Rnf213E9Q555 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Rnf213E9Q555 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Rnf213E9Q555 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Rnf213E9Q555 Gm5812-201ENSMUST00000061073 957 ntBASIC12.46□□□□□ -0.41
Rnf213E9Q555 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Rnf213E9Q555 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 12.1 ms