Protein–RNA interactions for Protein: C0HKE3

Hist1h2ad, Histone H2A type 1-D, mousemouse

Predictions only

Length 130 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hist1h2adC0HKE3 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Hist1h2adC0HKE3 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Hist1h2adC0HKE3 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Hist1h2adC0HKE3 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
Hist1h2adC0HKE3 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC22.43■■□□□ 1.18
Hist1h2adC0HKE3 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Hist1h2adC0HKE3 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
Hist1h2adC0HKE3 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
Hist1h2adC0HKE3 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Hist1h2adC0HKE3 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
Hist1h2adC0HKE3 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC22.38■■□□□ 1.17
Hist1h2adC0HKE3 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC22.38■■□□□ 1.17
Hist1h2adC0HKE3 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Hist1h2adC0HKE3 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC22.38■■□□□ 1.17
Hist1h2adC0HKE3 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
Hist1h2adC0HKE3 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Hist1h2adC0HKE3 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC22.37■■□□□ 1.17
Hist1h2adC0HKE3 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC22.36■■□□□ 1.17
Hist1h2adC0HKE3 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Hist1h2adC0HKE3 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Hist1h2adC0HKE3 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Hist1h2adC0HKE3 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC22.35■■□□□ 1.17
Hist1h2adC0HKE3 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
Hist1h2adC0HKE3 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Hist1h2adC0HKE3 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Hist1h2adC0HKE3 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC22.34■■□□□ 1.17
Hist1h2adC0HKE3 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC22.34■■□□□ 1.17
Hist1h2adC0HKE3 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC22.34■■□□□ 1.17
Hist1h2adC0HKE3 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC22.33■■□□□ 1.16
Hist1h2adC0HKE3 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
Hist1h2adC0HKE3 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC22.32■■□□□ 1.16
Hist1h2adC0HKE3 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
Hist1h2adC0HKE3 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC22.31■■□□□ 1.16
Hist1h2adC0HKE3 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Hist1h2adC0HKE3 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
Hist1h2adC0HKE3 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Hist1h2adC0HKE3 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
Hist1h2adC0HKE3 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Hist1h2adC0HKE3 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Hist1h2adC0HKE3 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
Hist1h2adC0HKE3 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Hist1h2adC0HKE3 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
Hist1h2adC0HKE3 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
Hist1h2adC0HKE3 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC22.28■■□□□ 1.16
Hist1h2adC0HKE3 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC22.27■■□□□ 1.16
Hist1h2adC0HKE3 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Hist1h2adC0HKE3 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Hist1h2adC0HKE3 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
Hist1h2adC0HKE3 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC22.27■■□□□ 1.16
Hist1h2adC0HKE3 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC22.26■■□□□ 1.15
Hist1h2adC0HKE3 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Hist1h2adC0HKE3 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Hist1h2adC0HKE3 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC22.26■■□□□ 1.15
Hist1h2adC0HKE3 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Hist1h2adC0HKE3 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
Hist1h2adC0HKE3 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC22.25■■□□□ 1.15
Hist1h2adC0HKE3 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
Hist1h2adC0HKE3 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
Hist1h2adC0HKE3 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC22.23■■□□□ 1.15
Hist1h2adC0HKE3 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Hist1h2adC0HKE3 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Hist1h2adC0HKE3 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
Hist1h2adC0HKE3 Amer2-203ENSMUST00000225247 2662 ntBASIC22.22■■□□□ 1.15
Hist1h2adC0HKE3 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC22.21■■□□□ 1.15
Hist1h2adC0HKE3 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Hist1h2adC0HKE3 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
Hist1h2adC0HKE3 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
Hist1h2adC0HKE3 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC22.19■■□□□ 1.14
Hist1h2adC0HKE3 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC22.19■■□□□ 1.14
Hist1h2adC0HKE3 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Hist1h2adC0HKE3 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC22.19■■□□□ 1.14
Hist1h2adC0HKE3 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Hist1h2adC0HKE3 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Hist1h2adC0HKE3 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC22.17■■□□□ 1.14
Hist1h2adC0HKE3 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Hist1h2adC0HKE3 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
Hist1h2adC0HKE3 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Hist1h2adC0HKE3 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC22.16■■□□□ 1.14
Hist1h2adC0HKE3 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
Hist1h2adC0HKE3 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
Hist1h2adC0HKE3 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC22.16■■□□□ 1.14
Hist1h2adC0HKE3 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Hist1h2adC0HKE3 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC22.16■■□□□ 1.14
Hist1h2adC0HKE3 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
Hist1h2adC0HKE3 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
Hist1h2adC0HKE3 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Hist1h2adC0HKE3 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Hist1h2adC0HKE3 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC22.14■■□□□ 1.13
Hist1h2adC0HKE3 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC22.13■■□□□ 1.13
Hist1h2adC0HKE3 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Hist1h2adC0HKE3 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC22.13■■□□□ 1.13
Hist1h2adC0HKE3 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC22.12■■□□□ 1.13
Hist1h2adC0HKE3 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC22.11■■□□□ 1.13
Hist1h2adC0HKE3 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC22.11■■□□□ 1.13
Hist1h2adC0HKE3 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Hist1h2adC0HKE3 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
Hist1h2adC0HKE3 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Hist1h2adC0HKE3 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Hist1h2adC0HKE3 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Hist1h2adC0HKE3 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms