Protein–RNA interactions for Protein: A0A0G2JG17

Trav23, T cell receptor alpha variable 23 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav23A0A0G2JG17 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Trav23A0A0G2JG17 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
Trav23A0A0G2JG17 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Trav23A0A0G2JG17 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Trav23A0A0G2JG17 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
Trav23A0A0G2JG17 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Trav23A0A0G2JG17 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
Trav23A0A0G2JG17 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC19.99■□□□□ 0.79
Trav23A0A0G2JG17 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Trav23A0A0G2JG17 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Trav23A0A0G2JG17 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Trav23A0A0G2JG17 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Trav23A0A0G2JG17 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Trav23A0A0G2JG17 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Trav23A0A0G2JG17 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Trav23A0A0G2JG17 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC19.96■□□□□ 0.79
Trav23A0A0G2JG17 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
Trav23A0A0G2JG17 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC19.95■□□□□ 0.78
Trav23A0A0G2JG17 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Trav23A0A0G2JG17 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Trav23A0A0G2JG17 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC19.95■□□□□ 0.78
Trav23A0A0G2JG17 AC153504.1-201ENSMUST00000218379 2290 ntBASIC19.94■□□□□ 0.78
Trav23A0A0G2JG17 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Trav23A0A0G2JG17 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Trav23A0A0G2JG17 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
Trav23A0A0G2JG17 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Trav23A0A0G2JG17 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Trav23A0A0G2JG17 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC19.92■□□□□ 0.78
Trav23A0A0G2JG17 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Trav23A0A0G2JG17 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Trav23A0A0G2JG17 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Trav23A0A0G2JG17 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Trav23A0A0G2JG17 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
Trav23A0A0G2JG17 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Trav23A0A0G2JG17 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
Trav23A0A0G2JG17 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
Trav23A0A0G2JG17 Gm24970-201ENSMUST00000175582 82 ntBASIC19.89■□□□□ 0.77
Trav23A0A0G2JG17 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Trav23A0A0G2JG17 Gm43863-201ENSMUST00000203822 1192 ntBASIC19.89■□□□□ 0.77
Trav23A0A0G2JG17 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Trav23A0A0G2JG17 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
Trav23A0A0G2JG17 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Trav23A0A0G2JG17 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Trav23A0A0G2JG17 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Trav23A0A0G2JG17 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC19.87■□□□□ 0.77
Trav23A0A0G2JG17 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC19.87■□□□□ 0.77
Trav23A0A0G2JG17 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
Trav23A0A0G2JG17 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Trav23A0A0G2JG17 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Trav23A0A0G2JG17 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Trav23A0A0G2JG17 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC19.85■□□□□ 0.77
Trav23A0A0G2JG17 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Trav23A0A0G2JG17 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
Trav23A0A0G2JG17 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Trav23A0A0G2JG17 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Trav23A0A0G2JG17 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Trav23A0A0G2JG17 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC19.83■□□□□ 0.76
Trav23A0A0G2JG17 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Trav23A0A0G2JG17 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC19.82■□□□□ 0.76
Trav23A0A0G2JG17 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
Trav23A0A0G2JG17 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Trav23A0A0G2JG17 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Trav23A0A0G2JG17 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Trav23A0A0G2JG17 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Trav23A0A0G2JG17 Gm6345-201ENSMUST00000180378 1691 ntBASIC19.81■□□□□ 0.76
Trav23A0A0G2JG17 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Trav23A0A0G2JG17 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Trav23A0A0G2JG17 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Trav23A0A0G2JG17 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Trav23A0A0G2JG17 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Trav23A0A0G2JG17 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Trav23A0A0G2JG17 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Trav23A0A0G2JG17 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Trav23A0A0G2JG17 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC19.78■□□□□ 0.76
Trav23A0A0G2JG17 AC157572.2-201ENSMUST00000226970 908 ntBASIC19.78■□□□□ 0.76
Trav23A0A0G2JG17 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Trav23A0A0G2JG17 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Trav23A0A0G2JG17 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC19.77■□□□□ 0.76
Trav23A0A0G2JG17 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
Trav23A0A0G2JG17 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trav23A0A0G2JG17 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
Trav23A0A0G2JG17 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Trav23A0A0G2JG17 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC19.76■□□□□ 0.75
Trav23A0A0G2JG17 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Trav23A0A0G2JG17 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trav23A0A0G2JG17 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Trav23A0A0G2JG17 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trav23A0A0G2JG17 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trav23A0A0G2JG17 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Trav23A0A0G2JG17 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Trav23A0A0G2JG17 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC19.73■□□□□ 0.75
Trav23A0A0G2JG17 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
Trav23A0A0G2JG17 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trav23A0A0G2JG17 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trav23A0A0G2JG17 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Trav23A0A0G2JG17 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Trav23A0A0G2JG17 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Trav23A0A0G2JG17 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Trav23A0A0G2JG17 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Trav23A0A0G2JG17 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 16.1 ms