Protein–RNA interactions for Protein: A0A0B4J1H4

Trbv19, T cell receptor beta, variable 19 (Fragment), mousemouse

Predictions only

Length 117 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv19A0A0B4J1H4 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC19,83■□□□□ 0,76
Trbv19A0A0B4J1H4 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC19,82■□□□□ 0,76
Trbv19A0A0B4J1H4 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC19,82■□□□□ 0,76
Trbv19A0A0B4J1H4 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC19,82■□□□□ 0,76
Trbv19A0A0B4J1H4 Gm16148-201ENSMUST00000119653 893 ntBASIC19,82■□□□□ 0,76
Trbv19A0A0B4J1H4 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC19,82■□□□□ 0,76
Trbv19A0A0B4J1H4 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC19,82■□□□□ 0,76
Trbv19A0A0B4J1H4 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC19,81■□□□□ 0,76
Trbv19A0A0B4J1H4 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC19,81■□□□□ 0,76
Trbv19A0A0B4J1H4 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC19,81■□□□□ 0,76
Trbv19A0A0B4J1H4 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC19,81■□□□□ 0,76
Trbv19A0A0B4J1H4 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC19,81■□□□□ 0,76
Trbv19A0A0B4J1H4 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC19,81■□□□□ 0,76
Trbv19A0A0B4J1H4 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC19,79■□□□□ 0,76
Trbv19A0A0B4J1H4 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC19,79■□□□□ 0,76
Trbv19A0A0B4J1H4 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC19,79■□□□□ 0,76
Trbv19A0A0B4J1H4 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC19,78■□□□□ 0,76
Trbv19A0A0B4J1H4 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC19,78■□□□□ 0,76
Trbv19A0A0B4J1H4 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC19,78■□□□□ 0,76
Trbv19A0A0B4J1H4 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC19,77■□□□□ 0,76
Trbv19A0A0B4J1H4 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC19,77■□□□□ 0,76
Trbv19A0A0B4J1H4 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC19,77■□□□□ 0,76
Trbv19A0A0B4J1H4 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC19,76■□□□□ 0,75
Trbv19A0A0B4J1H4 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC19,76■□□□□ 0,75
Trbv19A0A0B4J1H4 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC19,75■□□□□ 0,75
Trbv19A0A0B4J1H4 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC19,75■□□□□ 0,75
Trbv19A0A0B4J1H4 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC19,75■□□□□ 0,75
Trbv19A0A0B4J1H4 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC19,75■□□□□ 0,75
Trbv19A0A0B4J1H4 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC19,75■□□□□ 0,75
Trbv19A0A0B4J1H4 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC19,75■□□□□ 0,75
Trbv19A0A0B4J1H4 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC19,73■□□□□ 0,75
Trbv19A0A0B4J1H4 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC19,73■□□□□ 0,75
Trbv19A0A0B4J1H4 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC19,72■□□□□ 0,75
Trbv19A0A0B4J1H4 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC19,71■□□□□ 0,75
Trbv19A0A0B4J1H4 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC19,71■□□□□ 0,75
Trbv19A0A0B4J1H4 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC19,71■□□□□ 0,75
Trbv19A0A0B4J1H4 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC19,71■□□□□ 0,75
Trbv19A0A0B4J1H4 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC19,71■□□□□ 0,75
Trbv19A0A0B4J1H4 Fezf2-202ENSMUST00000224023 1917 ntBASIC19,7■□□□□ 0,74
Trbv19A0A0B4J1H4 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC19,7■□□□□ 0,74
Trbv19A0A0B4J1H4 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC19,7■□□□□ 0,74
Trbv19A0A0B4J1H4 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC19,69■□□□□ 0,74
Trbv19A0A0B4J1H4 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC19,69■□□□□ 0,74
Trbv19A0A0B4J1H4 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC19,69■□□□□ 0,74
Trbv19A0A0B4J1H4 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC19,69■□□□□ 0,74
Trbv19A0A0B4J1H4 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC19,67■□□□□ 0,74
Trbv19A0A0B4J1H4 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC19,66■□□□□ 0,74
Trbv19A0A0B4J1H4 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC19,66■□□□□ 0,74
Trbv19A0A0B4J1H4 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC19,66■□□□□ 0,74
Trbv19A0A0B4J1H4 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC19,66■□□□□ 0,74
Trbv19A0A0B4J1H4 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC19,65■□□□□ 0,74
Trbv19A0A0B4J1H4 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC19,65■□□□□ 0,74
Trbv19A0A0B4J1H4 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC19,65■□□□□ 0,74
Trbv19A0A0B4J1H4 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC19,65■□□□□ 0,74
Trbv19A0A0B4J1H4 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC19,65■□□□□ 0,74
Trbv19A0A0B4J1H4 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC19,65■□□□□ 0,74
Trbv19A0A0B4J1H4 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC19,64■□□□□ 0,74
Trbv19A0A0B4J1H4 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC19,64■□□□□ 0,73
Trbv19A0A0B4J1H4 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC19,63■□□□□ 0,73
Trbv19A0A0B4J1H4 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC19,62■□□□□ 0,73
Trbv19A0A0B4J1H4 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC19,62■□□□□ 0,73
Trbv19A0A0B4J1H4 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC19,62■□□□□ 0,73
Trbv19A0A0B4J1H4 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC19,6■□□□□ 0,73
Trbv19A0A0B4J1H4 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC19,6■□□□□ 0,73
Trbv19A0A0B4J1H4 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC19,6■□□□□ 0,73
Trbv19A0A0B4J1H4 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC19,6■□□□□ 0,73
Trbv19A0A0B4J1H4 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC19,6■□□□□ 0,73
Trbv19A0A0B4J1H4 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC19,6■□□□□ 0,73
Trbv19A0A0B4J1H4 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC19,59■□□□□ 0,73
Trbv19A0A0B4J1H4 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC19,59■□□□□ 0,73
Trbv19A0A0B4J1H4 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC19,59■□□□□ 0,73
Trbv19A0A0B4J1H4 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC19,59■□□□□ 0,73
Trbv19A0A0B4J1H4 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC19,59■□□□□ 0,73
Trbv19A0A0B4J1H4 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC19,58■□□□□ 0,73
Trbv19A0A0B4J1H4 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC19,58■□□□□ 0,73
Trbv19A0A0B4J1H4 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC19,58■□□□□ 0,72
Trbv19A0A0B4J1H4 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC19,58■□□□□ 0,72
Trbv19A0A0B4J1H4 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC19,56■□□□□ 0,72
Trbv19A0A0B4J1H4 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC19,55■□□□□ 0,72
Trbv19A0A0B4J1H4 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC19,55■□□□□ 0,72
Trbv19A0A0B4J1H4 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC19,55■□□□□ 0,72
Trbv19A0A0B4J1H4 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC19,55■□□□□ 0,72
Trbv19A0A0B4J1H4 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC19,54■□□□□ 0,72
Trbv19A0A0B4J1H4 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC19,54■□□□□ 0,72
Trbv19A0A0B4J1H4 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC19,54■□□□□ 0,72
Trbv19A0A0B4J1H4 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC19,53■□□□□ 0,72
Trbv19A0A0B4J1H4 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC19,53■□□□□ 0,72
Trbv19A0A0B4J1H4 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC19,53■□□□□ 0,72
Trbv19A0A0B4J1H4 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC19,53■□□□□ 0,72
Trbv19A0A0B4J1H4 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC19,51■□□□□ 0,71
Trbv19A0A0B4J1H4 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC19,51■□□□□ 0,71
Trbv19A0A0B4J1H4 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC19,51■□□□□ 0,71
Trbv19A0A0B4J1H4 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC19,51■□□□□ 0,71
Trbv19A0A0B4J1H4 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC19,51■□□□□ 0,71
Trbv19A0A0B4J1H4 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC19,51■□□□□ 0,71
Trbv19A0A0B4J1H4 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC19,5■□□□□ 0,71
Trbv19A0A0B4J1H4 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC19,5■□□□□ 0,71
Trbv19A0A0B4J1H4 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC19,5■□□□□ 0,71
Trbv19A0A0B4J1H4 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC19,49■□□□□ 0,71
Trbv19A0A0B4J1H4 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC19,49■□□□□ 0,71
Retrieved 100 of 76,532 protein–RNA pairs in 9,8 ms