Protein–RNA interactions for Protein: A0A075B648

Trav12-3, T cell receptor alpha variable 12-3 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12-3A0A075B648 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Trav12-3A0A075B648 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trav12-3A0A075B648 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trav12-3A0A075B648 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Trav12-3A0A075B648 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Trav12-3A0A075B648 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Trav12-3A0A075B648 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trav12-3A0A075B648 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Trav12-3A0A075B648 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trav12-3A0A075B648 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trav12-3A0A075B648 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC18.06■□□□□ 0.48
Trav12-3A0A075B648 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Trav12-3A0A075B648 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Trav12-3A0A075B648 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trav12-3A0A075B648 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Trav12-3A0A075B648 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Trav12-3A0A075B648 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trav12-3A0A075B648 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trav12-3A0A075B648 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trav12-3A0A075B648 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trav12-3A0A075B648 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Trav12-3A0A075B648 Gm17641-201ENSMUST00000166328 2350 ntBASIC18.02■□□□□ 0.48
Trav12-3A0A075B648 Gm27325-201ENSMUST00000175467 74 ntBASIC18.02■□□□□ 0.48
Trav12-3A0A075B648 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Trav12-3A0A075B648 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Trav12-3A0A075B648 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
Trav12-3A0A075B648 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Trav12-3A0A075B648 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Trav12-3A0A075B648 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC18■□□□□ 0.47
Trav12-3A0A075B648 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Trav12-3A0A075B648 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Trav12-3A0A075B648 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
Trav12-3A0A075B648 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trav12-3A0A075B648 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trav12-3A0A075B648 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trav12-3A0A075B648 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
Trav12-3A0A075B648 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trav12-3A0A075B648 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trav12-3A0A075B648 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trav12-3A0A075B648 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trav12-3A0A075B648 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trav12-3A0A075B648 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC17.94■□□□□ 0.46
Trav12-3A0A075B648 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trav12-3A0A075B648 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trav12-3A0A075B648 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trav12-3A0A075B648 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Trav12-3A0A075B648 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC17.94■□□□□ 0.46
Trav12-3A0A075B648 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trav12-3A0A075B648 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trav12-3A0A075B648 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Trav12-3A0A075B648 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
Trav12-3A0A075B648 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trav12-3A0A075B648 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Trav12-3A0A075B648 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Trav12-3A0A075B648 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trav12-3A0A075B648 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trav12-3A0A075B648 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trav12-3A0A075B648 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trav12-3A0A075B648 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trav12-3A0A075B648 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trav12-3A0A075B648 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Trav12-3A0A075B648 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Trav12-3A0A075B648 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
Trav12-3A0A075B648 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
Trav12-3A0A075B648 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Trav12-3A0A075B648 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trav12-3A0A075B648 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
Trav12-3A0A075B648 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Trav12-3A0A075B648 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC17.87■□□□□ 0.45
Trav12-3A0A075B648 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trav12-3A0A075B648 Il17rd-202ENSMUST00000223942 2186 ntBASIC17.87■□□□□ 0.45
Trav12-3A0A075B648 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
Trav12-3A0A075B648 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trav12-3A0A075B648 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trav12-3A0A075B648 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trav12-3A0A075B648 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC17.86■□□□□ 0.45
Trav12-3A0A075B648 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trav12-3A0A075B648 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
Trav12-3A0A075B648 Gm20634-201ENSMUST00000090779 2956 ntBASIC17.85■□□□□ 0.45
Trav12-3A0A075B648 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trav12-3A0A075B648 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trav12-3A0A075B648 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trav12-3A0A075B648 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trav12-3A0A075B648 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trav12-3A0A075B648 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.45
Trav12-3A0A075B648 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Trav12-3A0A075B648 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC17.83■□□□□ 0.45
Trav12-3A0A075B648 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Trav12-3A0A075B648 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC17.83■□□□□ 0.44
Trav12-3A0A075B648 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
Trav12-3A0A075B648 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trav12-3A0A075B648 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Trav12-3A0A075B648 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Trav12-3A0A075B648 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trav12-3A0A075B648 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trav12-3A0A075B648 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trav12-3A0A075B648 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trav12-3A0A075B648 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
Trav12-3A0A075B648 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Trav12-3A0A075B648 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms