Protein–RNA interactions for Protein: Q3US59

Gm28047, Predicted gene, 28047, mousemouse

Predictions only

Length 414 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28047Q3US59 Gm43555-201ENSMUST00000196588 310 ntBASIC8.55□□□□□ -1.04
Gm28047Q3US59 Mir1897-202ENSMUST00000198006 79 ntBASIC8.55□□□□□ -1.04
Gm28047Q3US59 Gm31881-202ENSMUST00000199455 559 ntTSL 3 BASIC8.55□□□□□ -1.04
Gm28047Q3US59 Gm44181-201ENSMUST00000203106 483 ntBASIC8.55□□□□□ -1.04
Gm28047Q3US59 Gm44129-201ENSMUST00000203511 675 ntTSL 3 BASIC8.55□□□□□ -1.04
Gm28047Q3US59 Gm32816-202ENSMUST00000206497 496 ntTSL 5 BASIC8.55□□□□□ -1.04
Gm28047Q3US59 Kcne3-205ENSMUST00000207358 1154 ntAPPRIS P1 TSL 5 BASIC8.55□□□□□ -1.04
Gm28047Q3US59 Gm18598-201ENSMUST00000207724 597 ntBASIC8.55□□□□□ -1.04
Gm28047Q3US59 Gm18469-201ENSMUST00000208850 439 ntBASIC8.55□□□□□ -1.04
Gm28047Q3US59 Olfr1245-201ENSMUST00000214870 1062 ntAPPRIS P1 BASIC8.55□□□□□ -1.04
Gm28047Q3US59 4930520K02Rik-201ENSMUST00000219522 388 ntTSL 3 BASIC8.55□□□□□ -1.04
Gm28047Q3US59 Gm33684-201ENSMUST00000221119 263 ntTSL 3 BASIC8.55□□□□□ -1.04
Gm28047Q3US59 Gm40598-201ENSMUST00000222953 547 ntBASIC8.55□□□□□ -1.04
Gm28047Q3US59 AC122309.1-201ENSMUST00000226945 421 ntBASIC8.55□□□□□ -1.04
Gm28047Q3US59 AC130673.1-201ENSMUST00000227992 435 ntBASIC8.55□□□□□ -1.04
Gm28047Q3US59 2010106E10Rik-201ENSMUST00000026602 1257 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
Gm28047Q3US59 Olfr1211-201ENSMUST00000099808 936 ntAPPRIS P1 BASIC8.55□□□□□ -1.04
Gm28047Q3US59 Inpp5d-208ENSMUST00000167032 4125 ntTSL 2 BASIC8.55□□□□□ -1.04
Gm28047Q3US59 Ipcef1-203ENSMUST00000105617 6041 ntAPPRIS P3 TSL 5 BASIC8.55□□□□□ -1.04
Gm28047Q3US59 Gm13769-202ENSMUST00000214797 2340 ntAPPRIS P1 TSL 3 BASIC8.55□□□□□ -1.04
Gm28047Q3US59 Ube4a-204ENSMUST00000138559 3374 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
Gm28047Q3US59 1810013D15Rik-203ENSMUST00000196971 1450 ntTSL 5 BASIC8.55□□□□□ -1.04
Gm28047Q3US59 AC131068.3-201ENSMUST00000228438 1456 ntBASIC8.55□□□□□ -1.04
Gm28047Q3US59 Mtfr1-202ENSMUST00000117529 1896 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Gm28047Q3US59 Erg-202ENSMUST00000113846 3249 ntAPPRIS P3 TSL 1 (best) BASIC8.55□□□□□ -1.04
Gm28047Q3US59 Prpf18-201ENSMUST00000035721 3522 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Gm28047Q3US59 Gm36283-203ENSMUST00000220211 3732 ntTSL 5 BASIC8.55□□□□□ -1.04
Gm28047Q3US59 Gm38244-201ENSMUST00000191737 2586 ntBASIC8.55□□□□□ -1.04
Gm28047Q3US59 Trim60-201ENSMUST00000048565 2670 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Gm28047Q3US59 Stra6l-203ENSMUST00000107783 3669 ntAPPRIS P3 TSL 5 BASIC8.55□□□□□ -1.04
Gm28047Q3US59 4933406G16Rik-201ENSMUST00000144854 1415 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
Gm28047Q3US59 Bmx-201ENSMUST00000112263 2433 ntAPPRIS ALT2 TSL 5 BASIC8.54□□□□□ -1.04
Gm28047Q3US59 Gm37245-201ENSMUST00000195137 2713 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
Gm28047Q3US59 Grik1-210ENSMUST00000228034 2708 ntBASIC8.54□□□□□ -1.04
Gm28047Q3US59 Asap1-215ENSMUST00000177035 3228 ntAPPRIS ALT2 TSL 5 BASIC8.54□□□□□ -1.04
Gm28047Q3US59 Dlgap2-201ENSMUST00000043279 3580 ntAPPRIS ALT2 TSL 5 BASIC8.54□□□□□ -1.04
Gm28047Q3US59 Olfr1357-204ENSMUST00000213877 2161 ntAPPRIS P1 TSL 5 BASIC8.54□□□□□ -1.04
Gm28047Q3US59 Vmn1r21-202ENSMUST00000203488 1673 ntAPPRIS P1 TSL 2 BASIC8.54□□□□□ -1.04
Gm28047Q3US59 Vmn1r21-203ENSMUST00000226191 1669 ntAPPRIS P1 BASIC8.54□□□□□ -1.04
Gm28047Q3US59 Gm40649-201ENSMUST00000219795 1457 ntTSL 5 BASIC8.54□□□□□ -1.04
Gm28047Q3US59 Igkv9-123-201ENSMUST00000103313 377 ntAPPRIS P1 BASIC8.54□□□□□ -1.04
Gm28047Q3US59 Gmfg-202ENSMUST00000108289 477 ntTSL 3 BASIC8.54□□□□□ -1.04
Gm28047Q3US59 Zfp967-201ENSMUST00000108997 417 ntTSL 3 BASIC8.54□□□□□ -1.04
Gm28047Q3US59 Zfp969-201ENSMUST00000109027 417 ntTSL 3 BASIC8.54□□□□□ -1.04
Gm28047Q3US59 Zfp965-203ENSMUST00000109043 417 ntTSL 5 BASIC8.54□□□□□ -1.04
Gm28047Q3US59 1700060C20Rik-201ENSMUST00000109506 605 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
Gm28047Q3US59 Gm11320-201ENSMUST00000119434 463 ntBASIC8.54□□□□□ -1.04
Gm28047Q3US59 Sel1l2-201ENSMUST00000120133 579 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
Gm28047Q3US59 Defa33-201ENSMUST00000120874 426 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Gm28047Q3US59 Gm14848-201ENSMUST00000121850 467 ntBASIC8.54□□□□□ -1.04
Gm28047Q3US59 n-R5s47-201ENSMUST00000122516 119 ntBASIC8.54□□□□□ -1.04
Gm28047Q3US59 Ino80c-202ENSMUST00000125169 756 ntTSL 3 BASIC8.54□□□□□ -1.04
Gm28047Q3US59 Sycp3-203ENSMUST00000125612 1169 ntAPPRIS ALT2 TSL 1 (best) BASIC8.54□□□□□ -1.04
Gm28047Q3US59 Gm11998-201ENSMUST00000146304 972 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
Gm28047Q3US59 Mgst2-203ENSMUST00000159554 486 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
Gm28047Q3US59 Defa2-201ENSMUST00000170275 426 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Gm28047Q3US59 Vmn1r-ps62-201ENSMUST00000173275 910 ntBASIC8.54□□□□□ -1.04
Gm28047Q3US59 Vmn2r-ps60-201ENSMUST00000173296 897 ntBASIC8.54□□□□□ -1.04
Gm28047Q3US59 Gm7763-201ENSMUST00000182220 1006 ntBASIC8.54□□□□□ -1.04
Gm28047Q3US59 Gm29348-201ENSMUST00000189555 779 ntTSL 3 BASIC8.54□□□□□ -1.04
Gm28047Q3US59 Gm38063-201ENSMUST00000193990 342 ntBASIC8.54□□□□□ -1.04
Gm28047Q3US59 Gm37404-201ENSMUST00000195726 359 ntBASIC8.54□□□□□ -1.04
Gm28047Q3US59 Gm38268-201ENSMUST00000195813 193 ntBASIC8.54□□□□□ -1.04
Gm28047Q3US59 Gm43664-201ENSMUST00000196038 734 ntBASIC8.54□□□□□ -1.04
Gm28047Q3US59 Gm43238-201ENSMUST00000196463 359 ntBASIC8.54□□□□□ -1.04
Gm28047Q3US59 Gm18690-201ENSMUST00000204488 985 ntBASIC8.54□□□□□ -1.04
Gm28047Q3US59 Mrpl22-201ENSMUST00000020820 722 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Gm28047Q3US59 Olfr892-ps1-201ENSMUST00000211998 932 ntAPPRIS P1 BASIC8.54□□□□□ -1.04
Gm28047Q3US59 1700047G07Rik-202ENSMUST00000212351 842 ntTSL 5 BASIC8.54□□□□□ -1.04
Gm28047Q3US59 Rpl32l-201ENSMUST00000216127 399 ntBASIC8.54□□□□□ -1.04
Gm28047Q3US59 Olfr1091-ps1-201ENSMUST00000216676 595 ntBASIC8.54□□□□□ -1.04
Gm28047Q3US59 Tespa1-202ENSMUST00000217702 1102 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
Gm28047Q3US59 AC151904.2-201ENSMUST00000218683 1177 ntBASIC8.54□□□□□ -1.04
Gm28047Q3US59 Gm35189-201ENSMUST00000219319 789 ntTSL 3 BASIC8.54□□□□□ -1.04
Gm28047Q3US59 Gm32515-201ENSMUST00000219396 350 ntTSL 2 BASIC8.54□□□□□ -1.04
Gm28047Q3US59 RMST_1.1-214ENSMUST00000220389 633 ntTSL 2 BASIC8.54□□□□□ -1.04
Gm28047Q3US59 AC134335.1-201ENSMUST00000227626 329 ntBASIC8.54□□□□□ -1.04
Gm28047Q3US59 5530400C23Rik-201ENSMUST00000048459 649 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Gm28047Q3US59 4930433N12Rik-201ENSMUST00000048921 1204 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
Gm28047Q3US59 1700024P04Rik-201ENSMUST00000054425 481 ntAPPRIS P1 BASIC8.54□□□□□ -1.04
Gm28047Q3US59 Vmn1r68-201ENSMUST00000058362 960 ntAPPRIS P1 BASIC8.54□□□□□ -1.04
Gm28047Q3US59 Olfr1502-201ENSMUST00000074221 951 ntAPPRIS P1 BASIC8.54□□□□□ -1.04
Gm28047Q3US59 Olfr742-201ENSMUST00000089836 1120 ntAPPRIS P1 BASIC8.54□□□□□ -1.04
Gm28047Q3US59 Crnkl1-201ENSMUST00000001818 3428 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Gm28047Q3US59 Cenpi-201ENSMUST00000081064 3227 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Gm28047Q3US59 Phactr2-204ENSMUST00000105546 2808 ntAPPRIS ALT2 TSL 5 BASIC8.54□□□□□ -1.04
Gm28047Q3US59 Olfr1324-202ENSMUST00000215270 5679 ntAPPRIS ALT2 TSL 2 BASIC8.54□□□□□ -1.04
Gm28047Q3US59 Gm839-201ENSMUST00000079186 1843 ntTSL 2 BASIC8.54□□□□□ -1.04
Gm28047Q3US59 Dock8-201ENSMUST00000025831 7810 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Gm28047Q3US59 Cd44-205ENSMUST00000111191 1533 ntAPPRIS ALT2 TSL 1 (best) BASIC8.54□□□□□ -1.04
Gm28047Q3US59 Rbms3-202ENSMUST00000068962 3320 ntAPPRIS P3 TSL 1 (best) BASIC8.54□□□□□ -1.04
Gm28047Q3US59 Cd44-206ENSMUST00000111192 1305 ntAPPRIS ALT2 TSL 5 BASIC8.54□□□□□ -1.04
Gm28047Q3US59 Gm6350-201ENSMUST00000195099 1339 ntBASIC8.54□□□□□ -1.04
Gm28047Q3US59 Gm44527-202ENSMUST00000204519 1314 ntBASIC8.54□□□□□ -1.04
Gm28047Q3US59 Oas2-201ENSMUST00000053909 3869 ntAPPRIS P3 TSL 1 (best) BASIC8.54□□□□□ -1.04
Gm28047Q3US59 Mlip-215ENSMUST00000185144 2921 ntAPPRIS ALT2 TSL 5 BASIC8.53□□□□□ -1.04
Gm28047Q3US59 Igsf1-201ENSMUST00000033442 4421 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Gm28047Q3US59 Mcm4-201ENSMUST00000023353 3589 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Gm28047Q3US59 9130409I23Rik-201ENSMUST00000036819 1898 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Gm28047Q3US59 4921525O09Rik-201ENSMUST00000220691 3270 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
Retrieved 100 of 76,532 protein–RNA pairs in 62.9 ms