Protein–RNA interactions for Protein: P59240

Nphp4, Nephrocystin-4, mousemouse

Predictions only

Length 1,425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nphp4P59240 BC106179-201ENSMUST00000055369 4128 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Nphp4P59240 Gm44101-201ENSMUST00000203951 2221 ntBASIC9.65□□□□□ -0.86
Nphp4P59240 Lage3-202ENSMUST00000114152 746 ntTSL 2 BASIC9.65□□□□□ -0.86
Nphp4P59240 Gm11434-201ENSMUST00000122379 629 ntBASIC9.65□□□□□ -0.86
Nphp4P59240 Gm11364-201ENSMUST00000137593 297 ntTSL 5 BASIC9.65□□□□□ -0.86
Nphp4P59240 Il4-203ENSMUST00000140684 530 ntTSL 2 BASIC9.65□□□□□ -0.86
Nphp4P59240 Gm23810-201ENSMUST00000175150 74 ntBASIC9.65□□□□□ -0.86
Nphp4P59240 Gm21301-201ENSMUST00000189476 699 ntBASIC9.65□□□□□ -0.86
Nphp4P59240 1700020G17Rik-203ENSMUST00000191286 723 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Nphp4P59240 Gm37148-201ENSMUST00000195097 716 ntTSL 5 BASIC9.65□□□□□ -0.86
Nphp4P59240 Gm40348-201ENSMUST00000199648 452 ntTSL 3 BASIC9.65□□□□□ -0.86
Nphp4P59240 Gm44896-201ENSMUST00000206190 772 ntBASIC9.65□□□□□ -0.86
Nphp4P59240 1810049I09Rik-202ENSMUST00000206760 556 ntBASIC9.65□□□□□ -0.86
Nphp4P59240 Gm3678-201ENSMUST00000218888 492 ntBASIC9.65□□□□□ -0.86
Nphp4P59240 4933412O06Rik-201ENSMUST00000222681 1123 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Nphp4P59240 AC154806.5-204ENSMUST00000228900 867 ntBASIC9.65□□□□□ -0.86
Nphp4P59240 Il4-201ENSMUST00000000889 590 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Nphp4P59240 Rps19-ps4-201ENSMUST00000091925 438 ntBASIC9.65□□□□□ -0.86
Nphp4P59240 Vwde-202ENSMUST00000203074 5626 ntAPPRIS P1 TSL 5 BASIC9.65□□□□□ -0.86
Nphp4P59240 Zkscan1-203ENSMUST00000110962 4843 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Nphp4P59240 Mpv17l-203ENSMUST00000128757 3089 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Nphp4P59240 Dennd2c-204ENSMUST00000173206 4879 ntAPPRIS ALT2 TSL 5 BASIC9.65□□□□□ -0.86
Nphp4P59240 Gm43169-201ENSMUST00000199544 4734 ntBASIC9.65□□□□□ -0.86
Nphp4P59240 Gm15834-202ENSMUST00000139825 2613 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Nphp4P59240 Mapk9-204ENSMUST00000109178 1302 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Nphp4P59240 C230057A21Rik-201ENSMUST00000194944 3331 ntBASIC9.65□□□□□ -0.86
Nphp4P59240 Svep1-201ENSMUST00000042850 11629 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Nphp4P59240 Gm26555-202ENSMUST00000180882 3726 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Nphp4P59240 Gm13821-201ENSMUST00000202029 3201 ntBASIC9.65□□□□□ -0.86
Nphp4P59240 Afap1l2-201ENSMUST00000111584 3597 ntAPPRIS ALT2 TSL 1 (best) BASIC9.65□□□□□ -0.86
Nphp4P59240 Nlrp3-201ENSMUST00000079476 3933 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Nphp4P59240 Zfp661-201ENSMUST00000077422 2765 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Nphp4P59240 Csde1-216ENSMUST00000199571 3123 ntAPPRIS ALT2 TSL 5 BASIC9.65□□□□□ -0.86
Nphp4P59240 AC124680.1-201ENSMUST00000223923 1585 ntBASIC9.65□□□□□ -0.86
Nphp4P59240 Myo1h-205ENSMUST00000169347 3545 ntAPPRIS ALT2 TSL 5 BASIC9.65□□□□□ -0.87
Nphp4P59240 Ano3-201ENSMUST00000099623 6705 ntAPPRIS P1 TSL 5 BASIC9.65□□□□□ -0.87
Nphp4P59240 Adcy10-202ENSMUST00000111439 5193 ntAPPRIS ALT2 TSL 5 BASIC9.65□□□□□ -0.87
Nphp4P59240 Abca14-201ENSMUST00000084640 5384 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
Nphp4P59240 BB218582-201ENSMUST00000123623 1024 ntTSL 1 (best) BASIC9.65□□□□□ -0.87
Nphp4P59240 1700025D23Rik-201ENSMUST00000129365 846 ntTSL 1 (best) BASIC9.65□□□□□ -0.87
Nphp4P59240 1700027A07Rik-201ENSMUST00000150472 458 ntTSL 1 (best) BASIC9.65□□□□□ -0.87
Nphp4P59240 Gm29154-209ENSMUST00000213614 878 ntTSL 5 BASIC9.65□□□□□ -0.87
Nphp4P59240 Gm46231-201ENSMUST00000220152 314 ntBASIC9.65□□□□□ -0.87
Nphp4P59240 Gm5928-201ENSMUST00000221839 466 ntBASIC9.65□□□□□ -0.87
Nphp4P59240 AC156790.1-201ENSMUST00000226572 559 ntBASIC9.65□□□□□ -0.87
Nphp4P59240 Primpol-206ENSMUST00000209787 1833 ntAPPRIS P1 TSL 5 BASIC9.65□□□□□ -0.87
Nphp4P59240 Stard13-202ENSMUST00000110483 5662 ntAPPRIS P3 TSL 1 (best) BASIC9.64□□□□□ -0.87
Nphp4P59240 Tcaf3-201ENSMUST00000069023 3110 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Nphp4P59240 Fbxw28-202ENSMUST00000112040 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC9.64□□□□□ -0.87
Nphp4P59240 Kpna2-201ENSMUST00000018506 2054 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Nphp4P59240 Rorb-203ENSMUST00000112832 9293 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Nphp4P59240 Apol10a-202ENSMUST00000119997 2286 ntAPPRIS P1 TSL 5 BASIC9.64□□□□□ -0.87
Nphp4P59240 Ablim1-207ENSMUST00000111529 5927 ntTSL 5 BASIC9.64□□□□□ -0.87
Nphp4P59240 Ptbp2-207ENSMUST00000197464 1742 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Nphp4P59240 Ctnnd1-216ENSMUST00000111690 5945 ntTSL 5 BASIC9.64□□□□□ -0.87
Nphp4P59240 Plekhh1-204ENSMUST00000219956 5229 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Nphp4P59240 Ncald-204ENSMUST00000120746 3407 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Nphp4P59240 Col6a5-201ENSMUST00000165165 8046 ntTSL 5 BASIC9.64□□□□□ -0.87
Nphp4P59240 Ctsl-205ENSMUST00000222517 6168 ntAPPRIS P1 TSL 5 BASIC9.64□□□□□ -0.87
Nphp4P59240 Cops2-202ENSMUST00000110462 1853 ntTSL 5 BASIC9.64□□□□□ -0.87
Nphp4P59240 AC154597.1-201ENSMUST00000224095 2713 ntBASIC9.64□□□□□ -0.87
Nphp4P59240 4930545L23Rik-201ENSMUST00000138303 2502 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Nphp4P59240 Gm11590-201ENSMUST00000118999 1455 ntBASIC9.64□□□□□ -0.87
Nphp4P59240 Prelid3b-202ENSMUST00000117442 683 ntTSL 3 BASIC9.64□□□□□ -0.87
Nphp4P59240 Gm12804-201ENSMUST00000121030 999 ntBASIC9.64□□□□□ -0.87
Nphp4P59240 Gm15551-201ENSMUST00000132762 535 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Nphp4P59240 Gm17217-201ENSMUST00000166613 469 ntBASIC9.64□□□□□ -0.87
Nphp4P59240 Gm36935-201ENSMUST00000192526 292 ntBASIC9.64□□□□□ -0.87
Nphp4P59240 Zfp799-202ENSMUST00000201499 651 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Nphp4P59240 Gm45350-201ENSMUST00000210560 509 ntTSL 5 BASIC9.64□□□□□ -0.87
Nphp4P59240 Gm34623-201ENSMUST00000210900 977 ntTSL 5 BASIC9.64□□□□□ -0.87
Nphp4P59240 Gm10037-203ENSMUST00000221620 636 ntAPPRIS P5 TSL 3 BASIC9.64□□□□□ -0.87
Nphp4P59240 AC154517.1-201ENSMUST00000222785 629 ntTSL 3 BASIC9.64□□□□□ -0.87
Nphp4P59240 Gm18955-201ENSMUST00000223173 649 ntBASIC9.64□□□□□ -0.87
Nphp4P59240 AC154323.2-201ENSMUST00000226557 1151 ntBASIC9.64□□□□□ -0.87
Nphp4P59240 Olfr1457-201ENSMUST00000075170 954 ntAPPRIS P1 BASIC9.64□□□□□ -0.87
Nphp4P59240 Gm29486-201ENSMUST00000088648 372 ntBASIC9.64□□□□□ -0.87
Nphp4P59240 Cbx3-ps4-201ENSMUST00000091531 549 ntBASIC9.64□□□□□ -0.87
Nphp4P59240 Bglap2-201ENSMUST00000098956 471 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Nphp4P59240 Ccdc191-206ENSMUST00000178400 3643 ntAPPRIS P2 TSL 5 BASIC9.64□□□□□ -0.87
Nphp4P59240 Slc16a14-201ENSMUST00000027422 3207 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Nphp4P59240 Map1a-202ENSMUST00000110639 10145 ntAPPRIS ALT2 TSL 5 BASIC9.64□□□□□ -0.87
Nphp4P59240 Actr6-201ENSMUST00000020109 1705 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Nphp4P59240 9630028H03Rik-201ENSMUST00000129868 2364 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Nphp4P59240 R3hdm2-203ENSMUST00000105249 3654 ntAPPRIS ALT2 TSL 5 BASIC9.64□□□□□ -0.87
Nphp4P59240 Gm8844-201ENSMUST00000119460 2614 ntBASIC9.63□□□□□ -0.87
Nphp4P59240 Rubcnl-201ENSMUST00000036072 2651 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Nphp4P59240 Csde1-211ENSMUST00000198180 3849 ntAPPRIS ALT2 TSL 1 (best) BASIC9.63□□□□□ -0.87
Nphp4P59240 Col12a1-202ENSMUST00000121227 9953 ntTSL 5 BASIC9.63□□□□□ -0.87
Nphp4P59240 Stxbp4-202ENSMUST00000107872 2529 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Nphp4P59240 Dach2-203ENSMUST00000113379 2512 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Nphp4P59240 Cast-210ENSMUST00000223126 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC9.63□□□□□ -0.87
Nphp4P59240 Efhb-201ENSMUST00000024725 2661 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Nphp4P59240 Kif9-202ENSMUST00000084952 2713 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Nphp4P59240 Baz2a-208ENSMUST00000220049 8443 ntAPPRIS P2 TSL 5 BASIC9.63□□□□□ -0.87
Nphp4P59240 AC162301.1-201ENSMUST00000228785 1542 ntBASIC9.63□□□□□ -0.87
Nphp4P59240 Iglc2-201ENSMUST00000103749 606 ntAPPRIS ALT2 TSL 1 (best) BASIC9.63□□□□□ -0.87
Nphp4P59240 Rpl23a-ps2-201ENSMUST00000119375 474 ntBASIC9.63□□□□□ -0.87
Nphp4P59240 2610204G07Rik-201ENSMUST00000131215 992 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Nphp4P59240 Gm12827-201ENSMUST00000132690 660 ntTSL 3 BASIC9.63□□□□□ -0.87
Retrieved 100 of 76,532 protein–RNA pairs in 50.1 ms